| General information of RDP00683 | |
|---|---|
| Gene Symbol: | DLX6-AS1 |
| RefSeq ID: | NR_015448 |
| Repeat coordinate: | chr7:97006109-97006136 (-) |
| Repeat size: | 9 |
| Repeat region: | intron |
| Repeat unit: | CGG |
| Repeat conservation: | PhastCons_score: 0.469; Repeat Conservation from UCSC Genome Browser |
| Amino acid sequence: | - |
| Gene expression and GO annotation: | BioGPS |
| Protein expression: | Human Protein Altas |
| Gene conservation: | Gene Conservation from UCSC Genome Browser |
| Mapping repeat track to 1000 Genomes: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
7
97006108
.
AGCCGCCGCCGCC
A
100
| Mapping repeat track to ESP: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
7
97006135
.
CGCA
C
.
| Mapping repeat track to ExAC: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
7
97006108
rs559903070
AGCCGCCGCCGCC
AGCCGCCGCCGCCGCC,AGCCGCCGCC,AGCCGCC,A,AGCCGCCGCCGCCGCCGCC,AGCC
32312895.68
7
97006110
.
C
CAA,T
4158278.99
7
97006111
rs540915866
C
A,CA,CACA
4172337.24
7
97006112
rs759250560
G
A
2018754.40
7
97006113
.
C
T,G
1985116.64
7
97006114
rs767433793
C
A
1985328.59
7
97006115
.
G
A
1828707.21
7
97006116
.
C
T,CAG
1829142.80
7
97006117
rs752474414
C
T,A,CGCA,CAGCAACAGCAACA
1832801.08
7
97006118
.
G
T,GCCT
781375.85
7
97006120
rs756156257
C
A
776608.18
7
97006121
.
G
A
106834.02
7
97006122
.
C
T
106443.09
7
97006123
.
CGCCGCCGCCGCCGCA
AGCCGCCGCCGCCGCA,C
108452.59
7
97006124
.
G
A
20389.38
7
97006126
rs764078276
CGCCGCCGCCGCA
AGCCGCCGCCGCA,C
21622.62
7
97006127
rs753699165
G
A
35747.65
7
97006129
.
CGCCGCCGCA
AGCCGCCGCA,C
11623.36
7
97006130
.
G
A
10069.81
7
97006132
rs755406705
CGCCGCA
AGCCGCA,CGCCGCAGCCGCA,CGCCGCCGCAGCCGCA,C
21867.36
7
97006133
.
G
A
11170.53
7
97006134
.
C
CCGCAGCCGCACT
11575.41
7
97006135
rs765647743
CGCA
AGCA,C
16331.36
| Mapping repeat track to gnomAD: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
7
97006108
rs559903070
AGCCGCCGCCGCC
AGCCGCCGCCGCCGCCGCC,AGCCGCCGCCGCCGCC,AGCCGCCGCC,AGCC,AGCCGCC,A
2894950.63
7
97006110
.
C
CAA
222753.55
7
97006111
rs540915866
C
A,CA
223830.86
7
97006112
rs759250560
G
A
212739.93
7
97006113
.
C
G
212422.62
7
97006114
rs767433793
C
A
212379.76
7
97006116
.
C
CAG
197649.81
7
97006117
rs752474414
C
CAGCAACAGCAACA
197667.62
7
97006123
.
CGCCGCCGCCGCCGCA
C
3506.31
7
97006132
rs755406705
C
CGCCGCA
4652.55
| Mapping repeat track to Kaviar: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
7
97006108
.
AGCCGCCGCCGCC
A
.
7
97006108
rs766970574
AGCC
A
.
7
97006108
rs766041677
AGCCGCC
A
.
7
97006108
rs752782873
AGCCGCCGCC
A
.
7
97006108
rs570498188
AGCCGCCGCCGCC
A,AGCC,AGCCGCC,AGCCGCCGCC,AGCCGCCGCCGCCGCC,AGCCGCCGCCGCCGCCGCC
.
7
97006111
rs540915866
C
A
.
7
97006111
.
CGCC
AACA
.
7
97006112
rs759250560
G
A
.
7
97006114
rs767433793
C
A
.
7
97006117
rs752474414
C
A
.
7
97006120
rs756156257
C
T
.
7
97006123
.
C
CG
.
7
97006126
rs764078276
C
T
.
7
97006127
rs753699165
G
A
.
7
97006132
rs755406705
CGCCGCA
C
.
7
97006135
rs765647743
C
CGCA
.