| General information of RDP00681 | |
|---|---|
| Gene Symbol: | BLOC1S5-TXNDC5 |
| RefSeq ID: | NR_037616 |
| Repeat coordinate: | chr6:7910637-7910655 (-) |
| Repeat size: | 6 |
| Repeat region: | intron |
| Repeat unit: | CGG |
| Repeat conservation: | PhastCons_score: 0.001; Repeat Conservation from UCSC Genome Browser |
| Amino acid sequence: | - |
| Gene expression and GO annotation: | BioGPS |
| Protein expression: | Human Protein Altas |
| Gene conservation: | Gene Conservation from UCSC Genome Browser |
| Mapping repeat track to 1000 Genomes: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
6
7910637
.
TCCG
TCCGCCG,T
100
| Mapping repeat track to ESP: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
6
7910637
.
TCCG
T,TCCGCCG
.
| Mapping repeat track to ExAC: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
6
7910637
rs759591654
TCCGCCGCCG
TCCGCCG,TCCGCCGCCGCCG,TCCG,TCCGCCGCCGCCGCCG,T
3834739.71
6
7910640
.
GCCGCCGCCGCCGCCGCCTCCTGGGCCCGGGCGCCCCAGCGC
G
2608489.41
6
7910642
rs765145244
C
T
76622.51
6
7910643
.
G
T
77463.33
6
7910652
.
G
A
1360.90
6
7910655
rs750207705
G
A,T
61229.95
| Mapping repeat track to gnomAD: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
6
7910637
rs759591654
TCCGCCG
TCCG,TCCGCCGCCG,T,TCCGCCGCCGCCG,TCCGCCGCCGCCGCCG
961954.64
6
7910649
.
GCCGCCGCCTCCTGGGCCCGGGCGCCCCAGCGC
G
859.39
6
7910655
rs750207705
G
A
5488.05
| Mapping repeat track to Kaviar: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
6
7910637
rs558989096
TCCG
TCCGCCG,T
.
6
7910637
rs765441660
TCCGCCGCCG
TCCGCCG,TCCGCCGCCGCCG,T
.
6
7910642
rs765145244
C
T
.
6
7910655
rs750207705
G
A
.