| General information of RDP00670 | |
|---|---|
| Gene Symbol: | LOC399975 |
| RefSeq ID: | NR_145484 |
| Repeat coordinate: | chr11:129279240-129279258 (-) |
| Repeat size: | 6 |
| Repeat region: | intron |
| Repeat unit: | CGG |
| Repeat conservation: | PhastCons_score: 0.010; Repeat Conservation from UCSC Genome Browser |
| Amino acid sequence: | - |
| Gene expression and GO annotation: | BioGPS |
| Protein expression: | Human Protein Altas |
| Gene conservation: | Gene Conservation from UCSC Genome Browser |
| Mapping repeat track to 1000 Genomes: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
11
129279240
.
CCCG
C
100
| Mapping repeat track to gnomAD: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
11
129279233
.
CCCTCCGCCCGCCGCCGCCG
C
457.51
11
129279236
.
TCCGCCCGCCGCCGCCGCCGCCGAGCG
T
28556.94
11
129279238
.
CGCCCG
TGCCCG,C
61650.16
11
129279240
rs560200022
CCCGCCG
CCCG,C,CCCGCCGCCG
10129465.45
11
129279243
.
GCC
G,GCCGCCGCCGCCGAGCGCCGCCC,GATCC
10147942.47
11
129279244
.
CCGCCGCCGCCGCCGAGCGCCGCCCG
C
105196.76
11
129279247
.
CCGCCGCCGCCGAGCGCCGCCCG
C
4760.73
| Mapping repeat track to Kaviar: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
11
129279240
rs560200022
CCCG
C
.
11
129279256
.
C
A
.
11
129279257
.
C
G
.