| General information of RDP00665 | |
|---|---|
| Gene Symbol: | ASH1L-AS1 |
| RefSeq ID: | NR_147963 |
| Repeat coordinate: | chr1:155562426-155562444 (+) |
| Repeat size: | 6 |
| Repeat region: | intron |
| Repeat unit: | CGG |
| Repeat conservation: | PhastCons_score: 0.997; Repeat Conservation from UCSC Genome Browser |
| Amino acid sequence: | - |
| Gene expression and GO annotation: | BioGPS |
| Protein expression: | Human Protein Altas |
| Gene conservation: | Gene Conservation from UCSC Genome Browser |
| Mapping repeat track to ExAC: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
1
155562415
.
TGGCGGCGGGAGCGGC
TGGCGGCGGGAGCGGCGGCGGCGGCGGCGGGAGCGGC,TGGCGGCGGGAGCGGCGGCGGGAGCGGC,TGGCGGCGGGAGCGGCGGCGGCGGCGGGAGCGGC,TGGCGGCGGGAGCGGCGGCGGCGGGAGCGGC,T
3364.58
1
155562425
rs760801465
AGCGGCGGCG
AGCGGCG,AGCGGCGGCGGCG,AGCGGCGGCGGCGGCG,AGCG,A
396192.07
1
155562430
rs755142818
C
T
10859.66
1
155562433
.
CGGCGGCGGCGGCAGCAGCAGAGTGGCGGCGGT
AGGCGGCGGCGGCAGCAGCAGAGTGGCGGCGGT,C
4351.76
1
155562435
.
G
C
1105.67
1
155562436
rs779169208
CGGCGGCGGCAGCAGCAGAGTGGCGGCGGT
TGGCGGCGGCAGCAGCAGAGTGGCGGCGGT,CGGCGGCGGCAGCAGCAGAGTGGCGGCGGCAGCAGCAGAGTGGCGGCGGT,C
10550.70
1
155562437
.
G
GGCGGCGGCAGCA
6216.62
1
155562439
.
CGGCGGCAGCAGCAGAGTGGCGGCGGT
C
6011.93
1
155562440
.
G
GGCGGCA,GGCGGCAGCA
8891.22
1
155562441
.
G
GCGT
9901.49
1
155562443
rs550620960
G
A,GGCA,C,GGCAGCA
11453.22
| Mapping repeat track to gnomAD: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
1
155562415
.
TGGCGGCGGGAGCGGC
T,TGGCGGCGGGAGCGGCGGCGGCGGCGGCGGGAGCGGC
1412.14
1
155562425
rs760801465
AGCG
AGCGGCG,A,AGCGGCGGCG
10233
1
155562440
.
G
GGCGGCAGCAGCA,A
1384.19
1
155562443
rs550620960
G
GGCA
818.46
| Mapping repeat track to Kaviar: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
1
155562425
rs764342062
AGCG
A
.
1
155562425
rs757359444
AGCGGCG
A,AGCG,AGCGGCGGCG,AGCGGCGGCGGCG
.
1
155562429
.
G
GC
.
1
155562430
rs755142818
C
T
.
1
155562436
rs779169208
CGGCGGCGGCAGCAGCAGAGTGGCGGCGGT
C
.
1
155562437
.
GGC
G
.
1
155562443
rs550620960
G
A
.