| General information of RDP00660 | |
|---|---|
| Gene Symbol: | LINC00693 |
| RefSeq ID: | NR_038840 |
| Repeat coordinate: | chr3:28575971-28575998 (+) |
| Repeat size: | 9 |
| Repeat region: | intron |
| Repeat unit: | CCG |
| Repeat conservation: | PhastCons_score: 0.859; Repeat Conservation from UCSC Genome Browser |
| Amino acid sequence: | - |
| Gene expression and GO annotation: | BioGPS |
| Protein expression: | Human Protein Altas |
| Gene conservation: | Gene Conservation from UCSC Genome Browser |
| Mapping repeat track to 1000 Genomes: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
3
28575969
.
GCGCCGC
G
100
| Mapping repeat track to gnomAD: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
3
28575969
rs762409693
GCGCCGCCGCCGCCGC
GCGCCGCCGC,GCGCCGCCGCCGC,GCGCCGC,GCGCCGCCGCCGCCGCCGC,GCGCCGCCGCCGCCGCCGCCGCCGC,G
14796056.32
3
28575971
.
GCC
G
14543587.33
3
28575974
.
GCCGC
G
14468618.55
3
28575982
.
C
T
26820.08
3
28575987
.
C
T
10577.80
3
28575991
.
C
A
170.48
3
28575992
.
G
A
427.59
| Mapping repeat track to Kaviar: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
3
28575967
.
AGGCGCCGC
AGG
.
3
28575969
.
GCGCCGC
G
.
3
28575969
rs754886117
GCGC
G
.
3
28575969
rs61090076
GCGCCGC
GCGC,GCGCCGCCGC,G
.
3
28575969
.
GCGCCGCCGCCGCCGC
GCGCCGCCGC,G
.
3
28575970
.
CGCCGCC
C
.
3
28575970
.
CGCCGCCGC
CGC
.
3
28575983
.
G
C
.
3
28575985
.
C
A
.
3
28575989
.
G
C
.
3
28575991
.
C
A
.
3
28575993
rs553837655
C
T
.