| General information of RDP00608 | |
|---|---|
| Gene Symbol: | FAM157B |
| RefSeq ID: | NR_146178 |
| Repeat coordinate: | chr9:138217087-138217120 (+) |
| Repeat size: | 11 |
| Repeat region: | exon |
| Repeat unit: | CAG |
| Repeat conservation: | PhastCons_score: 0.015; Repeat Conservation from UCSC Genome Browser |
| Amino acid sequence: | - |
| Gene expression and GO annotation: | BioGPS |
| Protein expression: | Human Protein Altas |
| Gene conservation: | Gene Conservation from UCSC Genome Browser |
| Mapping repeat track to ESP: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
9
138217086
.
GGCAGCAGCAGCA
G,GGCAGCAGCA,GGCAGCAGCAGCAGCA
.
| Mapping repeat track to ExAC: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
9
138217077
rs192658757
GGCAGCGGCGGCA
TGCAGCGGCGGCA,AGCAGCGGCGGCA,GGCAGCAGCGGCGGCA,GGCAGCGGCGGCAGCAGCAGCAGCAGCGGCGGCA,G
129905.27
9
138217089
rs748445978
A
G,AGCG
28206117.17
9
138217091
.
C
CAGT
27348571.99
9
138217092
rs772158827
AGC
AGCGGC,A
27349198.01
9
138217093
.
GCAGCAGCAGCA
G
27257493.18
9
138217094
.
C
T
27257739.35
9
138217095
rs768049461
AGCAGCAGCAG
A,GGCAGCAGCAG
27264344.42
9
138217096
.
G
GCAC
27213446.69
9
138217098
rs199863448
A
G
27220217.07
9
138217103
.
C
T
396543.04
9
138217104
rs575360606
A
AGCG
398709.21
9
138217106
rs538098004
C
A,T
13455.80
9
138217107
.
A
G
15753.66
9
138217108
.
G
A,GCAA
2345.57
9
138217110
.
A
T
2239.68
9
138217111
.
G
A
1913.40
9
138217113
.
A
T
1749.53
9
138217120
.
G
GCAT
2598.49
| Mapping repeat track to gnomAD: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
9
138217077
rs192658757
GGCAGCGGCGGCAGCA
GGCA,TGCAGCGGCGGCAGCA,G
5367.29
9
138217086
rs554298933
GGCAGCAGCAGCAGCA
GGCAGCAGCAGCAGCAGCA,GGCA,GGCAGCAGCAGCAGCAGCAGCA,GGCAGCAGCAGCAGCAGCAGCAGCA,G,GGCAGCAGCAGCAGCAGCAGCAGCAGCA
14376509.21
9
138217088
.
CA
C
4484833.89
9
138217089
rs748445978
A
G
4506795.01
9
138217090
.
GCAGCAGCAGCAGCA
GGCAGCAGCAGCA,G,GGCAGCA
4419615.99
9
138217092
rs772158827
A
G
4413016.37
9
138217095
rs768049461
A
G
4391240.78
9
138217099
.
GCAGCAGCAGCAGCAGCAGCAGCAA
G
104879.53
9
138217100
.
C
CAGCAGA
103670.06
9
138217106
rs538098004
C
T
1967.11
| Mapping repeat track to Kaviar: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
9
138217077
.
GGCAGCGGCGGCA
G,GGCAGCGGCGGCAGCA
.
9
138217083
.
GGCGGCAGCAGCAGCA
AGCA,GGCG
.
9
138217086
.
GGCAGCAGCAGCA
AGCAGCAGCAGCA,G,GGCAGCA,GGCAGCAGCA,GGCAGCAGCAGCAGCA,GGCAGCAGCAGCAGCAGCA
.
9
138217086
rs756752753
GGCA
G
.
9
138217086
rs779994680
GGCAGCA
G
.
9
138217086
.
GGCAGCAGCA
G
.
9
138217086
rs745746060
GGCAGCAGCAGCA
G,GGCAGCAGCAGCAGCA,GGCAGCAGCAGCAGCAGCA
.
9
138217086
.
GGCAGCAGCAGCAGCA
G
.
9
138217086
.
GGCAGCAGCAGCAGCAGCA
G,GGCAGCAGCAGCAGCAGCAGCA
.
9
138217089
rs762402947
A
G
.
9
138217089
rs748445978
A
AGCG
.
9
138217092
rs772158827
AGCAGCAGCAGC
A
.
9
138217095
rs768049461
A
G
.
9
138217098
rs199863448
A
G
.
9
138217104
rs575360606
A
G
.
9
138217104
rs773431551
A
AGCG
.
9
138217106
rs538098004
C
A
.