| General information of RDP00606 | |
|---|---|
| Gene Symbol: | FAM157A |
| RefSeq ID: | NR_146164 |
| Repeat coordinate: | chr3:198153260-198153299 (+) |
| Repeat size: | 13 |
| Repeat region: | exon |
| Repeat unit: | CAG |
| Repeat conservation: | PhastCons_score: 0.010; Repeat Conservation from UCSC Genome Browser |
| Amino acid sequence: | - |
| Gene expression and GO annotation: | BioGPS |
| Protein expression: | Human Protein Altas |
| Gene conservation: | Gene Conservation from UCSC Genome Browser |
| Mapping repeat track to ExAC: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
3
198153257
rs757576831
CTGGCAGCAGCAGCAG
CCAGCAG,CCAGCAGCAG,CCAG,C,CCAGCAGCAGCAG
5455305.34
3
198153259
rs776737123
GGCAGCAGCAGCA
GGCA,GGCAGCAGCAGCAGCA,G,GGCAGCAGCA,GGCAGCA
106166797.43
3
198153261
rs764941571
CA
C
82606525.93
3
198153262
rs752403819
A
G,AGCAGCAGCAGCAGCAGCG
81645382.70
3
198153263
.
GCAGCA
G
81012580.44
3
198153265
rs756109919
A
G,AGCAGCAGCAGCAGCG
69480735.86
3
198153267
rs777523667
C
T
55889839.32
3
198153268
rs748810384
A
G
54972468.68
3
198153270
rs773196278
CA
C
13264506.18
3
198153271
rs770494439
AGC
GGC,A
13467874.23
3
198153272
rs762934913
GCAGCAGCA
G
498614.03
3
198153274
rs765851650
AGCAGCAG
GGCAGCAG,A,AGCAGCGGCAGCAG
499412.41
3
198153275
rs751031918
GCA
G
68352.92
3
198153276
.
CAG
C
63725.23
3
198153277
.
AGC
A,AGCGGC
64920.06
3
198153278
rs754507069
GCAGC
G
28786.91
3
198153279
.
CAGCAGCA
C
28608.38
3
198153280
.
AGCAGCAG
GGCAGCAG,A
34756.16
3
198153283
.
A
T
14318.71
3
198153285
rs767141654
CA
C,CAGAA
6195.81
3
198153287
.
GCAGCAGCA
G
821.12
3
198153290
.
G
A
13885.88
3
198153292
.
A
T
22571.33
3
198153293
rs867221136
G
A
88130.68
3
198153295
rs868108219
A
T
66745.99
| Mapping repeat track to gnomAD: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
3
198153257
rs757576831
CTGGCAGCAGCAGCAGCAGCAG
CCAGCAGCAGCAG,CCAGCAGCAG,CCAGCAGCAGCAGCAG,C
622726.74
3
198153259
rs776737123
GGCAGCAGCAGCA
GGCA,GGCAGCA,GGCAGCAGCAGCAGCA,GGCAGCAGCA,G
12539970.52
3
198153262
rs752403819
A
G
11088275.19
3
198153263
.
GCAGCA
G
11054261.94
3
198153265
rs756109919
A
AGCAGCAGCAGCAGCG,G
10967328.25
3
198153268
rs748810384
A
G
7932806.09
3
198153271
rs770494439
A
G
370266.61
3
198153274
rs765851650
A
G
16339.98
3
198153280
.
A
G
2849.16
3
198153293
rs867221136
G
A
455.07
3
198153295
rs868108219
A
T
389.25
| Mapping repeat track to Kaviar: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
3
198153257
rs757576831
CTGGCAGCAG
C
.
3
198153257
rs779410848
CTGGCAGCAGCAG
C
.
3
198153259
rs747206500
GGCA
G
.
3
198153259
rs760326221
GGCAGCA
G,GGCA
.
3
198153259
rs56683636
GGCAGCAGCA
G,GGCA,GGCAGCA
.
3
198153259
rs768956677
GGCAGCAGCAGCA
G,GGCA,GGCAGCA,GGCAGCAGCA,GGCAGCAGCAGCAGCA,GGCAGCAGCAGCAGCAGCA
.
3
198153259
.
GGCAGCAGCAGCAGCAGCAGCA
G
.
3
198153262
rs752403819
A
G
.
3
198153265
rs756109919
A
G
.
3
198153267
rs777523667
C
T
.
3
198153268
rs748810384
A
G
.
3
198153271
rs770494439
A
G
.
3
198153272
rs762934913
GCAGCAGCA
G
.
3
198153274
rs765851650
AGCAGCAG
A
.
3
198153275
rs751031918
GCA
G
.
3
198153278
rs754507069
GCAGC
G
.
3
198153285
rs767141654
C
CAGA
.
3
198153293
.
G
A
.
3
198153295
.
A
T
.
3
198153297
.
C
G
.