| General information of RDP00603 | |
|---|---|
| Gene Symbol: | FAM157C |
| RefSeq ID: | NR_126161 |
| Repeat coordinate: | chr16:90102287-90102332 (+) |
| Repeat size: | 15 |
| Repeat region: | exon |
| Repeat unit: | CAG |
| Repeat conservation: | PhastCons_score: 0.046; Repeat Conservation from UCSC Genome Browser |
| Amino acid sequence: | - |
| Gene expression and GO annotation: | BioGPS |
| Protein expression: | Human Protein Altas |
| Gene conservation: | Gene Conservation from UCSC Genome Browser |
| Mapping repeat track to gnomAD: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
16
90102288
rs58731535
CA
C
3227976.21
16
90102289
rs12447065
A
G
3107582.59
16
90102290
rs57020701
GCAGCAGCAGCAGCAGCAGCA
GGCAGCAGCAGCAGCAGCA,GGCAGCAGCAGCAGCA,GGCA,G
2469256.74
16
90102292
.
A
G
2479114.95
16
90102293
rs575608304
G
A
1086916.01
16
90102295
.
A
G,AGCG,AGCC
1072269.96
16
90102296
rs60874147
G
GCAGCAGCAGCAGCAGCAGCAGCAA
961705.77
16
90102297
.
C
CAGCAGCAGCAGCAGCAGT
961484.53
16
90102298
.
A
AGCG
959395.09
16
90102299
.
G
GCAC
947392.22
16
90102300
.
C
T
946304.66
16
90102303
.
C
A
939239.28
16
90102305
.
G
A
43838.94
16
90102306
.
C
G
43675.60
16
90102307
.
A
G
43675.64
16
90102308
rs9922443
G
GCAGCAGCAGCAGCAGCAGCAGCAGCAA,GCAGCAGCAGCAGCAGCAGCAGCAA,GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAA,GCAGCAGCAGCAGCAGCAGCAA,GCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAA
210493.46
16
90102310
.
A
G
26910.52
16
90102315
.
CA
C
21002.81
16
90102318
.
C
T
171.42
16
90102324
.
C
A
171.81
16
90102328
.
AGC
A
439.88
16
90102331
.
AG
A
442.80
16
90102332
rs868419434
G
GCAGCAA,GCAGCAGCAGCAGCAGCAGCAGCAGCAA
1580.66
| Mapping repeat track to Kaviar: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
16
90102286
rs544421598
GGCA
G,GGCAGCA
.
16
90102286
.
GGCAGCA
G,GGCAGCAGCA,GGCAGCAGCAGCAGCAGCAGCA
.
16
90102286
.
GGCAGCAGCAGCAGCAGCA
G,GGCAGCAGCAGCAGCA,GGCAGCAGCAGCAGCAGCAGCA,GGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA,GGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
.
16
90102286
.
GGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
G
.
16
90102289
rs12447065
A
G
.
16
90102290
rs757793261
G
GCAT
.
16
90102290
rs57020701
GCA
G
.
16
90102292
.
A
G
.
16
90102293
rs575608304
G
A
.
16
90102294
rs59633829
CA
C,CG
.
16
90102296
.
G
GCAGCAGCAGCAGCAGCAGCAGCAA
.
16
90102296
rs60874147
GCAGCA
G
.
16
90102307
.
A
T
.
16
90102308
rs9922443
G
A
.
16
90102317
rs755246062
G
A
.