| General information of RDP00592 | |
|---|---|
| Gene Symbol: | SLC13A3 |
| RefSeq ID: | NM_001011554 |
| Repeat coordinate: | chr20:46578892-46578907 (-) |
| Repeat size: | 5 |
| Repeat region: | intron |
| Repeat unit: | GAC |
| Repeat conservation: | PhastCons_score: 0.001; Repeat Conservation from UCSC Genome Browser |
| Amino acid sequence: | - |
| Gene expression and GO annotation: | BioGPS |
| Protein expression: | Human Protein Altas |
| Gene conservation: | Gene Conservation from UCSC Genome Browser |
| Mapping repeat track to gnomAD: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
20
46578895
rs144909673
C
T
3550.89
20
46578896
.
G
A
1501.43
20
46578898
rs547556314
C
T
1082.36
20
46578901
rs181603388
C
T
55247.97
20
46578902
rs558133798
G
A
1618.58
20
46578904
rs576512023
C
T
2298.20
20
46578905
rs759708829
GTCATCA
GTCA,G,GTCATCATCA,GTCGTCATCATCA,GTCATCATCATCA
1802653.35
20
46578906
.
TCA
T
1767762.20
20
46578907
rs537715477
C
T
1942595.84
| Mapping repeat track to Kaviar: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
20
46578892
rs776288358
AGTC
A
.
20
46578895
rs144909673
C
T
.
20
46578898
rs547556314
C
T
.
20
46578899
rs566203278
G
A
.
20
46578901
rs181603388
C
T
.
20
46578902
rs558133798
G
A
.
20
46578904
rs576512023
C
T
.
20
46578905
rs754672662
G
GTCA
.
20
46578905
rs759708829
GTCA
G,GTCG
.
20
46578905
.
GTCATCA
G,GTCG,GTCGTCA
.
20
46578907
rs537715477
C
T
.
20
46578907
.
CA
CG,TG
.
20
46578907
.
CATCA
CG,CGTCA
.
20
46578907
.
CATCATCA
CG,CGTCA,CGTCATCA,CGTCGTCA,CGTCGTCATCA,TGTCATCA
.