| General information of RDP00583 | |
|---|---|
| Gene Symbol: | FSTL5 |
| RefSeq ID: | NM_001128427 |
| Repeat coordinate: | chr4:162066299-162066353 (-) |
| Repeat size: | 18 |
| Repeat region: | intron |
| Repeat unit: | GAA |
| Repeat conservation: | PhastCons_score: 0.001; Repeat Conservation from UCSC Genome Browser |
| Amino acid sequence: | - |
| Gene expression and GO annotation: | BioGPS |
| Protein expression: | Human Protein Altas |
| Gene conservation: | Gene Conservation from UCSC Genome Browser |
| Mapping repeat track to DisGeNET: | |||||
|---|---|---|---|---|---|
| Disease_name | RefSeq | Score | NofPmids | NofSnps | Source |
| Manic | NM_001128427 | 0.30 | 1 | 0 | CTD_human |
| Mapping repeat track to gnomAD: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
4
162066302
.
C
CTTCTTCTTCTTCTTCTTCT,CTTCTTCTTCTTCTTCTTCTT,CTTCTTCTTCTTCTTCT
170898.98
4
162066305
.
C
CTTCTTCTTCTTCTTCT,CTTCTTCTTCTTCT,CTTCTTCTTCTTCTTCTT
159684.37
4
162066308
rs796996376
C
CTTCTTCTTCTTCT,CTTCTTCTTCT
203838.40
4
162066311
rs759396784
C
CTTCTTCT,CTTCTTCTTCT
277680.26
4
162066314
rs756347359
C
CTTCTTCT,CTTCT,CT
254127.57
4
162066316
.
TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTC
T
234.55
4
162066317
rs373147359
C
CTTCT,CT,CTTCTT,CTTCTTCT,CTTTCTTCTTCTTCT
516217.10
4
162066318
rs796343397
TTC
T,TTCTTTCTTCTTCCTC
183924.45
4
162066319
.
TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTC
T
169818.36
4
162066320
rs376298926
C
CTT,CT,CTTCT
397906.41
4
162066321
rs770491207
TTC
T
670389.61
4
162066322
rs58234335
TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTC
TTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTC,T
895252.90
4
162066323
rs777084433
C
CT
898506.28
4
162066325
.
TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTC
T
38996.70
4
162066326
.
C
CT
38482.09
4
162066328
.
TCTTCTTCTTCTTCTTCTTCTTCTTCTC
T
46977.71
4
162066331
.
TCTTCTTCTTCTTCTTCTTCTTCTC
T
52375.84
4
162066334
rs556031994
TCTTCTTCTTCTTCTTCTTCTC
T
74881.55
4
162066337
.
TCTTCTTCTTCTTCTTCTCCTTCTTCTTCTTCTTCTC
TCTTCTTCTTCTTCTTCTC,T
57826.49
4
162066340
.
TCTTCTTCTTCTTCTC
T
107098.26
4
162066343
rs867980086
TCTTCTTCTTCTC
T,GCTTCTTCTTCTC
155659.37
4
162066346
rs199741858
TCTTCTTCTCCTTCTTCTTCTTCTTCTC
TCTTCTTCTTCTTCTTCTC,T
292383.01
4
162066347
.
C
CTTCTTA
291786.34
4
162066349
.
TCTTCTCCTTCTTCTTCTTCTTCTC
TCTTCTTCTTCTTCTTCTC,T
447535.82
4
162066350
.
C
A
447035.81
4
162066352
rs868352490
TCTCCTTCTTCTTCTTCTTCTC
TCTTCTTCTTCTTCTTCTC,T
773434.46
4
162066353
rs58240935
C
CT,CTTGT
769482.41
| Mapping repeat track to Kaviar: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
4
162066301
.
TC
T
.
4
162066305
.
C
CT
.
4
162066308
rs796996376
C
CTTCTTCTTCTTCT,CT
.
4
162066311
rs759396784
C
CTTCTTCTTCT,CT
.
4
162066314
rs756347359
C
CTTCT,CT
.
4
162066317
.
C
CTTCT
.
4
162066317
.
CTTC
CTTTC
.
4
162066317
.
CTTCTTC
CTTTCTTC
.
4
162066317
rs373147359
C
CTTCT,CT
.
4
162066318
.
TTC
T
.
4
162066318
.
TTCTTC
TTCT,TTCTTTC,TTTC
.
4
162066318
.
TTCTTCTTC
TTTCTTC
.
4
162066318
rs796343397
TTC
T,TTCT
.
4
162066318
rs757301469
TTCTTC
T,TTTC
.
4
162066319
.
TCT
T
.
4
162066320
.
C
T
.
4
162066320
.
CTTC
CTTTC
.
4
162066320
rs376298926
C
CTT,CT
.
4
162066321
.
TTC
T,TTTC
.
4
162066321
rs796842300
TTC
T,TT
.
4
162066321
rs770491207
TTCTTC
T
.
4
162066321
.
TTCTTCTTC
T
.
4
162066322
.
T
C
.
4
162066322
.
TCT
T
.
4
162066322
rs58234335
T
TC,TTCTTCTTCTTCTT,TTCTT,TTC,TT
.
4
162066322
rs35884839
TC
T,TT
.
4
162066323
rs777084433
C
CCT,CC,CT
.
4
162066326
.
C
CT
.
4
162066329
.
C
CT
.
4
162066334
rs556031994
T
C
.
4
162066335
.
C
CT
.
4
162066338
.
CTTCTTCTTCTTCTTCTCCTTCTTC
CTTCTTCTTCTTCTTCTTCTTCTTC
.
4
162066340
.
TC
T
.
4
162066342
.
TTCTTCTTCTTCTCCTTCT
TTCTTCTTCTTCTTCTTCT
.
4
162066343
.
T
C
.
4
162066343
.
TC
T
.
4
162066343
rs770127411
TCTTCTTCTTCTC
T
.
4
162066346
rs199741858
T
C
.
4
162066346
.
TCTTCTTCTCCTTC
TCTTCTTCTTCTTC
.
4
162066350
.
CTTCTC
CTTCTT
.
4
162066351
.
TTCTCC
TTCTTC
.
4
162066351
.
TTCTCCT
TTCTTCT
.
4
162066351
.
TTCTCCTTCTTCTTCTTCT
TTCTTCTTCTTCTTCTTCT
.
4
162066352
.
T
C
.
4
162066352
.
TCTC
TCTT
.
4
162066352
rs769996615
TCTC
TCTT,T
.
4
162066353
.
CTCC
CTTC
.
4
162066353
.
CTCCT
CTTCT
.
4
162066353
.
CTCCTTCTTC
CTTCTTCTTC
.
4
162066353
.
CTCCTTCTTCT
CTTCTTCTTCT
.
4
162066353
rs58240935
C
CT
.