| General information of RDP00573 | |
|---|---|
| Gene Symbol: | FSHR |
| RefSeq ID: | NM_000145 |
| Repeat coordinate: | chr2:49127832-49127898 (-) |
| Repeat size: | 22 |
| Repeat region: | intron |
| Repeat unit: | GAA |
| Repeat conservation: | PhastCons_score: 0.126; Repeat Conservation from UCSC Genome Browser |
| Amino acid sequence: | - |
| Gene expression and GO annotation: | BioGPS |
| Protein expression: | Human Protein Altas |
| Gene conservation: | Gene Conservation from UCSC Genome Browser |
| Mapping repeat track to OMIM: | ||
|---|---|---|
| Phenotype | OMIM_id | Location |
| Ovarian response to FSH stimulation, 276400 (3) | 136435 | 2p16.3 |
| Mapping repeat track to DisGeNET: | |||||
|---|---|---|---|---|---|
| Disease_name | RefSeq | Score | NofPmids | NofSnps | Source |
| Ovarian Hyperstimulation Syndrome, Familial Gestational Spontaneous | NM_000145 | 0.30 | 0 | 0 | CTD_human |
| Mapping repeat track to gnomAD: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
2
49127804
.
TCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
T
396170.82
2
49127807
.
TCTTCTTCTTCTTCTTCTTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
T
394714.92
2
49127811
.
CTTCTTCTTCTTCTTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT
TTTCTTCTTCTTCTTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT,C,CCTTCTTCTTCTTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT
402379.71
2
49127813
.
TCTTCTTCTTCTTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
TTTCTTCTTCTTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC,TCCTTCTTCTTCTTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC,T
397692.50
2
49127815
rs868249999
TTCTTCTTCTTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
CTCTTCTTCTTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC,TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC,T
399041.74
2
49127816
.
TCTTCTTCTTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
TTTCTTCTTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC,T,TTTC
435685.06
2
49127818
rs867382984
TTCTTCTTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC,CTCTTCTTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC,ATCTTCTTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC,T
176347.89
2
49127819
.
TCTTCTTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
TTTCTTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC,T,CCTTCTTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC,TTTC,TTTGAGACTTCTTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
144387.43
2
49127820
rs866211819
CTTCTTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT
TTTCTTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT,CCTTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT,CTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT,C
222090.33
2
49127821
.
TTCTTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
CTCTTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC,ATCTTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC,TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC,T
72720.14
2
49127822
.
TCTTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
T,TTTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC,TTTC,CCTTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC,TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
246355.97
2
49127824
rs28478725
TTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
CTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC,TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC,ATCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC,T
343375.18
2
49127825
.
TCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
TTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC,T,TTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC,TTTC,CCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
351535.38
2
49127826
.
CTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT
TTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT,CTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT,C,CCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT
487310.96
2
49127827
.
TTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC,CTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC,T,ATCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
444565.28
2
49127828
rs754847614
TCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC,TTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC,T,TCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC,CCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
682986.46
2
49127830
rs7568182
CTCTTCTTCTTCTTCT
CTTCTTCTTCTTCTTCT,TTCTTCTTCTTCTTCT,ATCTTCTTCTTCTTCT,CTTCTTCTTCTTCTTCTTCT,C
847143.77
2
49127831
.
TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
T,CCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC,TTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
486295.51
2
49127832
.
CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT
TTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT,CCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT,C,CTTTTTTTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT
543081.04
2
49127833
.
T
C,A,TTCC
292397.61
2
49127834
.
TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
TTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC,T
366868.48
2
49127835
rs142408171
C
T,CTTTTTTT
473964.86
2
49127836
.
T
C,A,TTCA
362866.11
2
49127837
.
TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
TTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC,T,CCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC,TTTCTTC
480628.84
2
49127838
.
CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT
TTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT,C,CCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT,CTTTTTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT
685080.69
2
49127839
.
TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
CTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC,TTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC,ATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC,TTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC,T
582341.48
2
49127840
.
TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
TTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC,T,CCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC,TTTC
635747.21
2
49127841
.
C
T
685447.33
2
49127842
.
TTC
CTC,T
607883.27
2
49127843
.
TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
TTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC,T
627003.66
2
49127844
.
CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT
TTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT,CCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT,C
665741.03
2
49127845
.
T
C
542918.77
2
49127846
.
TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
T,TTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
561899.33
2
49127847
.
CTTCT
TTTCT,C,GTTCT
577382.27
2
49127848
.
T
C
533386.60
2
49127849
.
TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
CCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC,T,TTTC,TTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
533532.28
2
49127850
.
CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT
TTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT,C
548027.95
2
49127851
.
TTC
CTC,T
541178.25
2
49127852
.
TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
TTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC,T,TTTC
539632.25
2
49127853
.
CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT
TTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT,C
545644.82
2
49127854
rs867355142
T
C
541137.98
2
49127855
.
TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
TTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC,T
538363.50
2
49127856
.
CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT
ATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT,TTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT,C
541553.69
2
49127857
rs867511772
T
C,TTCCTCTTCCTCTTCCTCTTCC
538938.50
2
49127858
.
TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
T,TTTC
548079.17
2
49127859
.
CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT
TTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT,CCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT,C
539464.45
2
49127860
rs866350137
T
C,TTCCTCTTCCTCTTCCTCTTCC,TTCCTCTTCCTCTTCC
537441.98
2
49127861
.
TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
T
537731.19
2
49127862
.
CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT
TTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT,C,CTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT
537837.43
2
49127863
.
TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
CTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC,TTCCTCTTCCTCTTCCTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC,T,TTCCTCTTCCTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
537359.76
2
49127864
.
TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
T,TTTC
555204.98
2
49127865
.
CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT
TTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT,C
564559.20
2
49127866
.
T
C
555202.97
2
49127867
.
TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
T,TTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
556765.26
2
49127868
.
CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT
TTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT,C
568033.73
2
49127869
rs866623670
TTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
CTCTTCTTCTTCTTCTTCTTCTTCTTCTTC,T
556503.42
2
49127870
.
TCTTCTTCTTCTTCTTCTTCTTCTTCTTC
T,TTTCTTCTTCTTCTTCTTCTTCTTCTTC,TTTC
577819.83
2
49127871
.
CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTTTTTT
TTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTTTTTT,C
590337.89
2
49127872
.
TTCTTCTTCTTCTTCTTCTTCTTCTTC
CTCTTCTTCTTCTTCTTCTTCTTCTTC,T
578438.01
2
49127873
.
TCTTCTTCTTCTTCTTCTTCTTCTTC
T,TTTCTTCTTCTTCTTCTTCTTCTTC,TTTC
612658.39
2
49127874
.
CTT
TTT,C
622817.32
2
49127875
.
TTCTTCTTCTTCTTCTTCTTCTTC
CTCTTCTTCTTCTTCTTCTTCTTC,T
599264.18
2
49127876
.
TCTTCTTCTTCTTCTTCTTCTTC
TTTCTTCTTCTTCTTCTTCTTC,T,TTTC,TTTCTTC
703024.31
2
49127877
.
C
T
709321.18
2
49127878
rs528027014
TTCTTCTTCTTCTTCTTCTTC
T,CTCTTCTTCTTCTTCTTCTTC
676151.57
2
49127879
.
TCTTCTTCTTCTTCTTCTTC
T,TTTCTTCTTCTTCTTCTTC,TTTC
813191.46
2
49127880
.
C
T
822785.45
2
49127881
.
TTCTTCTTCTTCTTCTTC
CTCTTCTTCTTCTTCTTC,T
790405.49
2
49127882
.
TCTTCTTCTTCTTCTTC
TTTCTTCTTCTTCTTC,TTTC,T
963919.30
2
49127883
.
C
CCTTCTTCT,T
978174.99
2
49127884
rs549222416
TTCTTCTTCTTCTTC
T,CTCTTCTTCTTCTTC
902901.84
2
49127885
.
TCTTCTTCTTCTTC
T,TTTC,TTTCTTC,TTTCTTCTTCTTC
1115403.22
2
49127886
.
CT
TT,C
1125808.63
2
49127887
.
TTCTTCTTCTTC
CTCTTCTTCTTC,T
965539.97
2
49127888
.
TCTTCTTCTTC
TTTCTTCTTC,T,TTTC,TTTCTTC
1255563.35
2
49127889
rs201686960
C
T
1268348.29
2
49127890
rs567524829
TTCTTCTTC
CTCTTCTTC,T
1041011.60
2
49127891
rs35236514
TCTTCTTC
T,TTTCTTC,CCTTCTTC,TTTC
1388610.57
2
49127892
rs368830515
C
T,CT,CTT
1395480.56
2
49127893
.
TTCTTC
T,CTCTTC
1234208.34
2
49127894
rs201814642
TCTTC
T,TTTC
1504478.43
2
49127895
rs200408081
CTTCT
TTTCT,C,CTTTTTTCT
1540963.37
2
49127896
rs200824820
TTC
CTC,T
1362567.86
2
49127897
rs66528420
TC
T
1445557.09
| Mapping repeat track to Kaviar: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
2
49127739
.
TTCTTCTTCTTCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTC
TTCTTTCTTCTTCTTCCTCTTC
.
2
49127739
.
TTCTTCTTCTTCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
TTCTTTCTTCTTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTCTT
.
2
49127743
.
TCTTCTTCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
TTCTTCTTCTTCCTCTTCTT,TTCTTCTTCTTCCTCTTCTTT
.
2
49127744
.
CTTCTTCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
TCTTCTTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTT
.
2
49127752
.
TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTT
.
2
49127771
.
TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
T
.
2
49127784
.
CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
TT
.
2
49127786
.
TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
T
.
2
49127835
rs142408171
C
T
.
2
49127836
.
T
C
.
2
49127839
.
T
C
.
2
49127839
.
TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTTTT
TTTTTT
.
2
49127841
.
C
T
.
2
49127842
.
T
C
.
2
49127845
.
T
C
.
2
49127848
.
T
C
.
2
49127851
.
T
C
.
2
49127853
.
C
G
.
2
49127854
.
T
C
.
2
49127855
.
TC
T
.
2
49127857
.
T
C
.
2
49127861
.
TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
T,TTTCTT
.
2
49127869
.
T
C
.
2
49127872
.
T
C
.
2
49127875
.
TTC
T
.
2
49127878
rs528027014
T
C
.
2
49127880
.
CTTCTTCTTCTTCTTCTTC
CTTCTTCTTCTTCTTCTTT
.
2
49127883
.
CTTCTTCTTCTTCTTC
CTTCTTCTTCTTCTTT
.
2
49127884
rs549222416
T
C
.
2
49127885
.
TC
T
.
2
49127887
.
TTC
T
.
2
49127888
rs201686960
TC
T,TT
.
2
49127889
.
CTTCTTCTTC
CTTCTTCTTT
.
2
49127890
rs567524829
T
C
.
2
49127891
.
TC
T
.
2
49127891
rs35236514
TC
T,TT
.
2
49127891
rs772104318
TCTTC
T
.
2
49127892
.
CTTCTTC
CTTCTTT
.
2
49127892
rs771660880
C
CTT,CT
.
2
49127892
rs768836280
CTTCT
C
.
2
49127894
.
TC
T
.
2
49127894
rs200408081
TC
T,TT
.
2
49127894
rs201814642
TCTTC
TCTTT,T
.
2
49127895
.
C
CTT,CT
.
2
49127895
rs200824820
CT
CC,C
.
2
49127896
rs750861663
T
TC,TTT
.
2
49127897
.
TC
T,TT,TTT
.
2
49127897
rs7568202
TC
TCTTTT,T,TT,TTT
.
2
49127898
rs766862227
C
CTTTT
.
2
49127898
.
CT
C
.