| General information of RDP00568 | |
|---|---|
| Gene Symbol: | PAQR5 |
| RefSeq ID: | NM_001104554 |
| Repeat coordinate: | chr15:69322691-69322769 (+) |
| Repeat size: | 26 |
| Repeat region: | intron |
| Repeat unit: | GAA |
| Repeat conservation: | PhastCons_score: 0.002; Repeat Conservation from UCSC Genome Browser |
| Amino acid sequence: | - |
| Gene expression and GO annotation: | BioGPS |
| Protein expression: | Human Protein Altas |
| Gene conservation: | Gene Conservation from UCSC Genome Browser |
| Mapping repeat track to gnomAD: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
15
69322691
rs12898515
GGAA
GGAAGAAGAAGAA,GGAAGAAGAAGAAGAAGAA,GGAAGAAGAA,GGAAGAAGAAGAAGAA,GGAAGAA,G
581113.38
15
69322692
.
GAAGAAGAA
G
244104.10
15
69322696
.
A
G
125105.04
15
69322697
rs866731977
A
G
126040.83
15
69322698
.
G
A
91878.32
15
69322699
.
A
G
87615.08
15
69322700
rs868650744
A
G
87823.60
15
69322706
rs796357220
A
G
59233.67
15
69322721
.
A
G
17735.46
15
69322723
.
A
AGGG
6054.12
15
69322724
rs192237043
A
G
5876.20
15
69322725
.
GA
G
79723.69
15
69322726
.
A
G,AGGG
87563.72
15
69322727
rs60227278
A
G
12131.62
15
69322728
.
GAA
G
92705.73
15
69322729
rs60270671
A
G
97974.46
15
69322730
.
A
G
125455.34
15
69322731
.
GA
G
6651.76
15
69322732
.
A
G,AGGG
171760.58
15
69322733
.
A
G
1551.31
15
69322734
.
GAA
G
12862.11
15
69322735
.
A
AGGG,G
17425.36
15
69322736
rs187949915
A
G
45495.06
15
69322738
rs755601009
AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGG
GAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGG,AGGGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGG,A,AAGGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGG
99904.27
15
69322739
rs763745141
AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGGAGAAGAAGAAGACGAGGAAGAAGAAGAAGAGGAAGAG
GGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGGAGAAGAAGAAGACGAGGAAGAAGAAGAAGAGGAAGAG,A,CGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGGAGAAGAAGAAGACGAGGAAGAAGAAGAAGAGGAAGAG
14634.17
15
69322741
.
A
G,AGGG
130129.59
15
69322742
.
AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGGAGAAGAAGAAGACGAGGAAGAAGAAGAAGAGGAAGAG
GGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGGAGAAGAAGAAGACGAGGAAGAAGAAGAAGAGGAAGAG,A,CGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGGAGAAGAAGAAGACGAGGAAGAAGAAGAAGAGGAAGAG
111068.78
15
69322743
.
GA
G
16056.45
15
69322744
.
AAGAAGAAGAAGAAGAAGAAGAAGAAGAGGG
GAGAAGAAGAAGAAGAAGAAGAAGAAGAGGG,AGGGAGAAGAAGAAGAAGAAGAAGAAGAAGAGGG,A
201628.68
15
69322745
rs59406608
AGAAGAAGAAGAAGAAGAAGAAGAAGAGGGAGAAGAAGAAGACGAGGAAGAAGAAGAAGAGGAAGAG
GGAAGAAGAAGAAGAAGAAGAAGAAGAGGGAGAAGAAGAAGACGAGGAAGAAGAAGAAGAGGAAGAG,CGAAGAAGAAGAAGAAGAAGAAGAAGAGGGAGAAGAAGAAGACGAGGAAGAAGAAGAAGAGGAAGAG,A
55543.50
15
69322746
.
GAAGAA
G,GAGAA
39343.35
15
69322747
.
AAGAAGAAGAAGAAGAAGAAGAAGAGGG
GAGAAGAAGAAGAAGAAGAAGAAGAGGG,A,AGGGAGAAGAAGAAGAAGAAGAAGAAGAGGG
165666.40
15
69322748
rs61531917
AGAAGAAGAAGAAGAAGAAGAAGAGGGAGAAGAAGAAGACGAGGAAGAAGAAGAAGAGGAAGAG
CGAAGAAGAAGAAGAAGAAGAAGAGGGAGAAGAAGAAGACGAGGAAGAAGAAGAAGAGGAAGAG,GGAAGAAGAAGAAGAAGAAGAAGAGGGAGAAGAAGAAGACGAGGAAGAAGAAGAAGAGGAAGAG,A
232346.78
15
69322749
.
GAA
G,GA
71714.51
15
69322750
.
AAGAAGAAGAAGAAGAAGAAGAGGG
GAGAAGAAGAAGAAGAAGAAGAGGG,A,AGGGAGAAGAAGAAGAAGAAGAAGAGGG,ACGAGAAGAAGAAGAAGAAGAAGAGGG
106510.57
15
69322751
rs779926347
AGAAGAAGAAGAAGAAGAAGAGGGAGAAGAAGAAGACGAGGAAGAAGAAGAAGAGGAAGAG
GGAAGAAGAAGAAGAAGAAGAGGGAGAAGAAGAAGACGAGGAAGAAGAAGAAGAGGAAGAG,A,AGGAAGAAGAAGAAGAAGAAGAGGGAGAAGAAGAAGACGAGGAAGAAGAAGAAGAGGAAGAG,AGACGAGGAAGAAGAAGAAGAAGAAGAGGGAGAAGAAGAAGACGAGGAAGAAGAAGAAGAGGAAGAG,AGATGAGGAAGAAGAAGAAGAAGAAGAGGGAGAAGAAGAAGACGAGGAAGAAGAAGAAGAGGAAGAG
315572.55
15
69322752
rs59573012
GAA
G
61342.71
15
69322753
.
AAGAAGAAGAAGAAGAAGAGGG
GAGAAGAAGAAGAAGAAGAGGG,A,AGGGAGAAGAAGAAGAAGAAGAGGG
176133.41
15
69322754
rs866002018
AGAAGAAGAAGAAGAAGAGGGAGAAGAAGAAGACGAGGAAGAAGAAGAAGAGGAAGAG
GGAAGAAGAAGAAGAAGAGGGAGAAGAAGAAGACGAGGAAGAAGAAGAAGAGGAAGAG,CGAAGAAGAAGAAGAAGAGGGAGAAGAAGAAGACGAGGAAGAAGAAGAAGAGGAAGAG,AGACGAGGAAGAAGAAGAAGAAGAGGGAGAAGAAGAAGACGAGGAAGAAGAAGAAGAGGAAGAG,A,TGAAGAAGAAGAAGAAGAGGGAGAAGAAGAAGACGAGGAAGAAGAAGAAGAGGAAGAG
204182.70
15
69322756
.
AAGAAGAAGAAGAAGAGGG
GAGAAGAAGAAGAAGAGGG,AGGGAGAAGAAGAAGAAGAGGG,A,ACGAGAAGAAGAAGAAGAGGG,AAGAAGAAGAAGAAGAGGGAGAAGAAGAAGAAGAGGG
229401.22
15
69322757
.
A
AGACGAG,G,AG,AGAAGACGAG,AGAAGAAGATGAG
381343.86
15
69322758
.
GA
G
80385.11
15
69322759
.
AAGAAGAAGAAGAGGG
AGGGAGAAGAAGAAGAGGG,GAGAAGAAGAAGAGGG,A,AGGAAGAGGGAGAAGAAGAAGAGGG
143584.45
15
69322760
rs375297021
AGAAGAAGAAGAGGGAGAAGAAGAAGACGAGGAAGAAGAAGAAGAGGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAG
CGAAGAAGAAGAGGGAGAAGAAGAAGACGAGGAAGAAGAAGAAGAGGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAG,AGAAGAAGAAGAAGAGGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAG,GGAAGAAGAAGAGGGAGAAGAAGAAGACGAGGAAGAAGAAGAAGAGGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAG,A,AGAAGAAGAAGAAGAAGAAGAAGAAGAG
225286.89
15
69322761
.
GAAGAAGAAGAGGGAGAAGAAGAAGACGAGGAAGAAGAAGAAGAGGAAGAGGAAGAAGAAGAAGAAGAAGAA
G
97648.58
15
69322762
.
AAGAAGAAGAGGG
AGGGAGAAGAAGAGGG,GAGAAGAAGAGGG,A
183657.97
15
69322763
rs58485265
AGAAGAAGAGGGAGAAGAAGAAGACGAGGAAGAAGAAGAAGAGGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAG
GGAAGAAGAGGGAGAAGAAGAAGACGAGGAAGAAGAAGAAGAGGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAG,AGAAGAAGAAGAAGAGGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAG,CGAAGAAGAGGGAGAAGAAGAAGACGAGGAAGAAGAAGAAGAGGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAG,A,AGAAGAAGAAGAAGAAGAAGAAGAAGAG
334230.17
15
69322764
.
GA
G
126805.63
15
69322765
.
AAGAAGAGGG
A,GAGAAGAGGG,AGGGAGAAGAGGG
176520.13
15
69322766
rs867233680
AGAAGAGGGAGAAGAAGAAGACGAGGAAGAAGAAGAAGAGGAAGAG
AGAAGAAGAAGAAGAGGAAGAG,GGAAGAGGGAGAAGAAGAAGACGAGGAAGAAGAAGAAGAGGAAGAG,A,AGAGGAAGAAGAAGAAGAGGAAGAG,AGAGGAAGAGGGAGAAGAAGAAGACGAGGAAGAAGAAGAAGAGGAAGAG
606958.54
15
69322767
.
GAAGAGGGAGAAGAAGAAGACGAGGAAGAAGAAGAAGAGGAAGAGGAAGAAGAAGAAGAAGAAGAA
G,GAGAGGGAGAAGAAGAAGACGAGGAAGAAGAAGAAGAGGAAGAGGAAGAAGAAGAAGAAGAAGAA
179287.69
15
69322768
.
AAGAGGG
GAGAGGG,A
332960.73
15
69322769
rs867861308
A
C,AGAAGAT,AGAAGAAGAT,AGAT,T
464376.13
| Mapping repeat track to Kaviar: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
15
69322693
.
A
G
.
15
69322694
.
A
G
.
15
69322697
.
A
G
.
15
69322700
.
A
C
.
15
69322703
.
A
G
.
15
69322706
rs796357220
A
G
.
15
69322708
.
AAGA
AAGG
.
15
69322709
.
A
C
.
15
69322709
.
AGAAGAAGAAGAAGAAGAAGA
AGAAGAAGAAGAAGAAGAGGG
.
15
69322712
rs369080030
A
C,G
.
15
69322712
.
AGA
GGG
.
15
69322713
.
GAAGAAGA
GAAGAGGG
.
15
69322714
.
A
G
.
15
69322715
.
A
G,T
.
15
69322715
.
AGA
GGG
.
15
69322717
.
A
G
.
15
69322718
.
A
G
.
15
69322718
.
AGA
GGG
.
15
69322720
.
A
G
.
15
69322721
.
A
C,G
.
15
69322721
.
AGA
GGG
.
15
69322723
.
A
G
.
15
69322724
rs192237043
A
G
.
15
69322725
.
G
A
.
15
69322726
.
A
G
.
15
69322726
.
AAGAAGAAGAAG
AAGAGGAAGAGG
.
15
69322727
rs60227278
A
G
.
15
69322727
.
AGA
GGG
.
15
69322727
.
AGAA
GGGA
.
15
69322729
rs60270671
A
G
.
15
69322730
.
A
G
.
15
69322730
.
AGA
AGG
.
15
69322732
.
A
G
.
15
69322733
.
A
G,T
.
15
69322733
.
AGA
GGG
.
15
69322735
.
A
G
.
15
69322736
rs187949915
A
G,T
.
15
69322736
.
AGA
GGG
.
15
69322738
.
A
G
.
15
69322738
rs755601009
A
AGGG
.
15
69322739
rs763745141
A
C,G,T
.
15
69322739
.
AGAAGAAGAAG
GGAAGAAGAAG
.
15
69322741
.
A
G
.
15
69322741
.
AAGAAG
AAGACG
.
15
69322742
.
A
G
.
15
69322742
.
AGAAGAAGA
AGAGGGAGA
.
15
69322744
.
A
G
.
15
69322745
rs59406608
A
C,G,T
.
15
69322745
.
AGA
GGG
.
15
69322748
rs61531917
A
C,G,T
.
15
69322751
rs59700882
A
G
.
15
69322751
rs779926347
A
AGACGAG
.
15
69322752
rs59573012
GAA
G
.
15
69322754
.
A
C,G
.
15
69322754
.
AGAAGAAGAAGAAGAAGAGGGAGAAGAAGAAGAC
AGAAGAAGAAGAAGAAGAGGGAGAAGAAGAAGAAGAT
.
15
69322755
.
GAAGAAGAAGAAGAAGAGGGAGAAGAAGAAGACGAGGAAGAAGAAGAAGAGGAAGAGGAAGAAGAAGAAGAAGAAGAA
GAAGAAGAAGAAGAAGAGGGAGAAGAAGAAGAAGACGAGGAAGAAGAAGAAGAGGAAGAGGAAGAAGAAGAAGAAGAAGAA
.
15
69322757
.
A
C,G
.
15
69322760
rs375297021
A
C,G
.
15
69322763
rs58485265
A
G,T
.
15
69322764
.
G
A
.
15
69322766
.
A
G
.
15
69322766
.
AGAAGAGGGA
GGAAGAAGAA
.
15
69322768
.
A
G
.
15
69322769
.
A
G
.
15
69322769
.
AGAGGG
AGAGGGAGA,GGGAGA
.