| General information of RDP00566 | |
|---|---|
| Gene Symbol: | STARD13 |
| RefSeq ID: | NM_001243476 |
| Repeat coordinate: | chr13:33499519-33499603 (-) |
| Repeat size: | 28 |
| Repeat region: | intron |
| Repeat unit: | GAA |
| Repeat conservation: | PhastCons_score: 0.026; Repeat Conservation from UCSC Genome Browser |
| Amino acid sequence: | - |
| Gene expression and GO annotation: | BioGPS |
| Protein expression: | Human Protein Altas |
| Gene conservation: | Gene Conservation from UCSC Genome Browser |
| Mapping repeat track to DisGeNET: | |||||
|---|---|---|---|---|---|
| Disease_name | RefSeq | Score | NofPmids | NofSnps | Source |
| Liver Cirrhosis, Experimental | NM_001243476 | 0.30 | 1 | 0 | CTD_human |
| Mapping repeat track to gnomAD: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
13
33499520
.
T
TTCTTCC,TTCC
161996.87
13
33499521
rs9537702
TCTTCTTC
T
159977.46
13
33499522
rs9537703
CTT
CTTT,CTTTCTTT,C
245785.27
13
33499523
rs552914746
TTCTTCTTCTTCTTC
TTTCTTCTTCTTC,T,TTTCTTC,TTTCTTCTTC,TTTC
1176444.87
13
33499524
.
T
C
1169235.16
13
33499525
.
CTTCT
CTTTCT,TTTCT,CTCT,C,CCT
1165387.61
13
33499526
rs572018742
TTC
T,TTCTTCTTCTTCCTC,CTC,TTCTTCCTC
514855.67
13
33499528
.
CT
CTT,CTTTCTTTCTT,C
538496.88
13
33499529
rs61430184
TTCTTCTTC
TTTCTTC,TTTC,T,CTCTTCTTC,TTCCTCTTCTTC
706535.91
13
33499531
rs71074903
CTT
CT,CTTT,C
700068.57
13
33499532
.
TTC
CTC,T
201941.55
13
33499534
.
CTT
C,CTTT,TTT,CT
221802.42
13
33499535
rs60104234
TTC
T,CTC
234838.98
13
33499536
.
T
C
226790.07
13
33499537
.
CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT
CTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT,C
234748.46
13
33499538
rs539307615
TTC
CTC,T
41578.05
13
33499540
.
C
CT,T
46172.29
13
33499541
rs60873046
TTCTTCTTC
TTTCTTC,CTCTTCTTC,TTTC,T
139554.17
13
33499543
.
C
CT
140502.62
13
33499544
.
T
G
12167.01
13
33499546
.
C
CT
19493.19
13
33499547
.
TTC
T
49610.22
13
33499549
.
C
CT
49932.50
13
33499554
.
T
A
1531.85
13
33499556
.
TTC
T
1415.58
13
33499561
.
C
CT
1156.53
13
33499564
.
CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT
C
2014.38
13
33499565
.
T
TTCC
2188.70
13
33499567
.
C
A
2122.53
13
33499570
.
CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT
C
3019.84
13
33499574
.
TTC
T
3801.14
13
33499576
.
CTTCTTCTTCTTCTTCTTCTTCTTCTTCT
C
4348.83
13
33499577
.
TTCTTCTTCTTCTTCTTCTTCTTCTTCTTTCTTCTTCTTCTTCTTCTTCTTC
TTTCTTCTTCTTCTTCTTCTTCTTCTTTCTTCTTCTTCTTCTTCTTCTTC,T,TTTCTTCTTCTTCTTCTTC
6144.85
13
33499580
.
TTCTTCTTCTTCTTCTTCTTCTTCTTTCTTCTTCTTCTTCTTCTTCTTC
T,TTTCTTCTTCTTCTTCTTCTTCTTTCTTCTTCTTCTTCTTCTTCTTC
8122.94
13
33499582
.
CTTCTTCTTCTTCTTCTTCTTCT
CTTTCTTCTTCTTCTTCTTCTTCT,C
8553.30
13
33499583
.
TTCTTCTTCTTCTTCTTCTTCTTTCTTCTTCTTCTTCTTCTTCTTC
TTTCTTCTTCTTCTTCTTCTTTCTTCTTCTTCTTCTTCTTCTTC,TTTCTTCTTCTTCTTCTTCTTC,T
28718.16
13
33499584
.
TCTTCTTCTTCTTCTTCTTCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTC
TTTCTTCTTCTTCTTCTTCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTC,TCCTTCTTCTTCTTCTTCTTCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTC,T,CCTTCTTCTTCTTCTTCTTCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTC
30989.21
13
33499585
.
CTTCTTCTTCTTCTTCTTCTTTCTTCTTCTTCTTCTT
CCTTCTT,CTTCTTCTTCTTCTTCTT,CCTTCTTCTTCTTCTTCTTTCTTCTTCTTCTTCTT,C
33509.13
13
33499586
.
TTCTTCTTCTTCTTCTTCTTTCTTCTTCTTCTTCTTCTTCTTC
TTTCTTCTTCTTCTTCTTTCTTCTTCTTCTTCTTCTTCTTC,T
43262.67
13
33499587
.
T
TC,C
43837.15
13
33499588
.
CTTCTTCTTCTTCTTCTTTCTTCTTCTT
CTTTCTTCTTCTTCTTCTTTCTTCTTCTT,CTTCTTCTTCTT,C,CCTTCTTCTT
45903.60
13
33499589
.
TTCTTCTTCTTCTTCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
TTTCTTCTTCTTCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC,TTTCTTCTTCTTCTTCTTCTTCTTCTTC,TTTCTTC,T,CTCTTCTTCTTCTTCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
60670.87
13
33499590
.
T
TC
58790.40
13
33499591
.
CTTCTTCTTCTTCTTTCTTCTTCTTCTTCTT
CTTCTTCTTCTTCTTCTT,CTTTCTTCTTCTTCTTTCTTCTTCTTCTTCTT,CCTTCTT,C,CCTTCTTCTTCTT
68085.51
13
33499592
.
TTCTTCTTCTTCTTTCTTCTTCTTCTTCTTCTTCTTC
TTTCTTCTTCTTTCTTCTTCTTCTTCTTCTTCTTC,T,TTTCTTCTTCTTCTTC,TTTCTTCTTCTTCTTCTTCTTC
69078.01
13
33499593
.
T
TC,C
70214.86
13
33499594
.
CTTCTTCTTCTTTCTTCTTCTT
CTTCTTCTTCTT,CTTTCTTCTTCTTTCTTCTTCTT,CCTTCTTCTTTCTTCTTCTT,CCTT,C
87042.23
13
33499595
.
TTCTTCTTCTTTCTTCTTCTTCTTCTTCTTCTTC
TTTCTTCTTTCTTCTTCTTCTTCTTCTTCTTC,TTTCTTCTTCTTCTTCTTCTTC,T,TTTCTTCTTCTTCTTC,TTTCTTCTTCTTCTTCTTC
90035.70
13
33499596
.
T
TC
88697.25
13
33499597
.
CTTCTTCTTTCTTCTTCTTCTT
CTTTCTTCTTTCTTCTTCTTCTT,CTTCTTCTTCTTCTT,CCTTCTT,CCTT,C
158360.72
13
33499598
.
TTCTTCTTTCTTCTTCTTCTTCTTCTTCTTC
TTTCTTTCTTCTTCTTCTTCTTCTTCTTC,TTTCTTCTTCTTCTTCTTC,T,CTCTTCTTTCTTCTTCTTCTTCTTCTTCTTC,TTTCTTCTTCTTCTTCTTCTTC
157464.99
13
33499599
.
T
TC,C
160335.31
13
33499600
.
CTTCTTTCTTCTTCTT
CTTCTTCTTCTT,CCTT,CCTTCTTCTT,C,CTTTCTTTCTTCTTCTT
231703.86
13
33499601
rs868322231
TTCTTTCTTCTTCTTCTTCTTCTTCTTC
TTTCTTCTTCTTCTTCTTCTTC,TTTCTTCTTCTTCTTCTTC,CTCTTTCTTCTTCTTCTTCTTCTTCTTC,T
231801.92
13
33499602
.
T
TC
228760.74
13
33499603
rs866942322
CTTTCTTCTTCTT
C,CCTT,CTTCTTCTTCTT,CCTTCTTCTT,CCTTCTT
1664044.76
| Mapping repeat track to Kaviar: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
13
33499495
.
CCTTCTTCTTCTTCTTCTTCTTTCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT
C
.
13
33499508
.
CTTCTTCTTTCTTTCTTCTTCTTCTTC
CTTCTTTCTTTCTTTCTTCTTCTTCTTC,TCTTCTTCTTCTTCTTTCTTTCT,TCTTCTTCTTCTTCTTTCTTTCTTTCTTCTTC,TCTTCTTCTTCTTCTTTCTTTCTTTCTTTC,TCTTCTTCTTCTTCTTTCTTTTCTTTCTTC
.
13
33499514
.
CTTTCTTTCTTCTTC
CTTCTTCTTTCTTTCT
.
13
33499515
.
TTTCTT
TTCTTCTT
.
13
33499515
.
TTTCTTTC
TTCTTCT
.
13
33499521
rs9537702
T
C
.
13
33499521
.
TC
CT
.
13
33499522
rs9537703
C
CT,T
.
13
33499522
rs533627507
C
CT
.
13
33499523
rs552914746
T
C
.
13
33499523
.
TTCT
TTTCTT
.
13
33499523
rs375053009
TTC
T,TTTCT
.
13
33499524
.
T
C
.
13
33499524
.
TC
T,TT,TTCT
.
13
33499525
.
CT
TCTT
.
13
33499525
.
CTTC
TCT
.
13
33499525
.
CTTCTT
TCTTTCTT
.
13
33499525
.
CTTCTTC
TCTTTCT
.
13
33499525
.
C
CT
.
13
33499526
rs572018742
T
C
.
13
33499527
.
TCTTC
TTCT
.
13
33499528
.
CTTC
TCT
.
13
33499528
.
CTTCTTC
TCTTTC
.
13
33499528
.
C
CT
.
13
33499529
rs61430184
TTC
T
.
13
33499531
rs71074903
C
CT
.
13
33499532
.
T
C
.
13
33499535
.
TTC
T
.
13
33499535
rs60104234
TTC
T
.
13
33499538
rs539307615
T
C
.
13
33499538
rs756831193
TTC
T
.
13
33499539
.
T
C
.
13
33499541
rs60873046
TTC
T
.
13
33499542
.
T
C
.
13
33499545
.
T
C
.
13
33499547
.
T
C
.
13
33499550
.
T
C
.
13
33499553
.
T
C,G
.
13
33499553
.
TTC
T
.
13
33499556
.
T
C,G
.
13
33499556
.
TTCTTCTTCTTCTTCTTCTTCTTCTTCT
CTCTTCTTCCTCTTTCTCTTCTTCCTCT
.
13
33499559
rs367935636
T
C,G
.
13
33499559
.
TTC
T
.
13
33499562
.
T
C
.
13
33499565
.
T
C,G
.
13
33499565
.
TTC
T
.
13
33499566
.
TCTTC
TCCTC
.
13
33499568
.
T
C,G
.
13
33499571
.
T
C
.
13
33499572
.
T
C
.
13
33499574
.
T
C
.
13
33499575
.
T
C
.
13
33499576
.
C
CT
.
13
33499577
.
T
C
.
13
33499578
.
T
TC
.
13
33499579
.
C
CT
.
13
33499580
.
T
C
.
13
33499581
.
T
TC
.
13
33499582
.
C
CT
.
13
33499583
.
T
C
.
13
33499584
.
T
TC
.
13
33499585
.
C
CT
.
13
33499586
.
T
C
.
13
33499587
.
TCT
CCC
.
13
33499587
.
T
TC
.
13
33499588
.
CT
TC
.
13
33499588
.
C
CT
.
13
33499589
.
T
C
.
13
33499589
.
TTC
T
.
13
33499590
.
T
C
.
13
33499590
.
TCT
CCC
.
13
33499590
.
T
TC
.
13
33499591
.
CTTCTTCTTC
CTCCTTCTTC
.
13
33499591
.
C
CT
.
13
33499592
.
T
C
.
13
33499593
.
T
C
.
13
33499593
.
T
TC
.
13
33499594
.
C
CT
.
13
33499595
.
T
C
.
13
33499595
.
TTCT
GTCC
.
13
33499596
.
T
C
.
13
33499596
.
TCT
CCC
.
13
33499596
.
TC
T
.
13
33499598
.
T
C,G
.
13
33499599
.
T
TTC
.
13
33499600
.
C
T
.
13
33499601
.
T
C
.
13
33499602
.
TCT
CC
.
13
33499602
.
TCTT
CCC
.
13
33499603
.
C
T
.
13
33499603
.
CTTTCT
CCTTCT
.
13
33499603
rs12871386
CT
CC,C,CTTC
.