| General information of RDP00557 | |
|---|---|
| Gene Symbol: | ANKUB1 |
| RefSeq ID: | NM_001144960 |
| Repeat coordinate: | chr3:149766819-149766879 (-) |
| Repeat size: | 20 |
| Repeat region: | intron |
| Repeat unit: | CTG |
| Repeat conservation: | PhastCons_score: 0.005; Repeat Conservation from UCSC Genome Browser |
| Amino acid sequence: | - |
| Gene expression and GO annotation: | BioGPS |
| Protein expression: | Human Protein Altas |
| Gene conservation: | Gene Conservation from UCSC Genome Browser |
| Mapping repeat track to 1000 Genomes: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
3
149766857
.
AGCAGCAGCAGCAGCAGCAGCAG
A
100
| Mapping repeat track to gnomAD: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
3
149766817
rs867501350
AAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
A,AAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC,AAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC,AAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC,AAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC,AAGCAGC
11866362.26
3
149766819
.
GCAGCA
GGCA,G
8772766.34
3
149766820
.
CA
C
8744299.11
3
149766821
.
A
G
8617572.16
3
149766822
.
GCAGCAGCAGC
G
8633882.08
3
149766823
.
C
CAGT
8612960.42
3
149766825
.
G
GCAGCAA
8509872.17
3
149766826
.
C
T
8509926.53
3
149766828
.
GCA
G
8299742.22
3
149766831
.
GCAGCAGCAGCAGCAGCAGCAGCAGCAGC
G
7961758.38
3
149766840
.
G
GCAGCAC
7670008.37
3
149766841
.
C
CAGCAGCAGCAGCAGA
7669439.01
3
149766848
.
A
AGCAGCAAGG
106074.26
3
149766849
.
GC
G
104336.70
3
149766851
.
AGC
A
73888.50
3
149766852
.
G
A
74874.17
3
149766853
.
CA
C
79538.42
3
149766855
.
GCAGCAGCAGCAGCAGCAGCAGCAGCA
G
57184.97
3
149766856
.
CAGCAGCAGCAGCAGCAGCAGCAGCAAGG
C
61903.37
| Mapping repeat track to Kaviar: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
3
149766816
rs80163885
AAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
A
.
3
149766817
rs369146206
AAGC
A
.
3
149766817
.
AAGCAGCAGC
A
.
3
149766817
.
AAGCAGCAGCAGC
A
.
3
149766817
.
AAGCAGCAGCAGCAGC
A
.
3
149766817
.
AAGCAGCAGCAGCAGCAGC
A
.
3
149766817
.
AAGCAGCAGCAGCAGCAGCAGC
A
.
3
149766817
.
AAGCAGCAGCAGCAGCAGCAGCAGC
AAGCAGCAGCAGCAGCAGCAGC,A
.
3
149766817
rs61034562
AAGCAGCAGCAGCAGCAGCAGCAGCAGC
AAGC,A
.
3
149766817
rs11268295
AAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
AAGC,AAGCAGC,AAGCAGCAGC,AAGCAGCAGCAGCAGC,AAGCAGCAGCAGCAGCAGC,AAGCAGCAGCAGCAGCAGCAGC,AAGCAGCAGCAGCAGCAGCAGCAGCAGC,AAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC,A
.
3
149766817
.
AAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
AAGC,A
.
3
149766817
.
AAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
A
.
3
149766817
.
AAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
AAGCAGCAGC,A
.
3
149766818
.
AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
AGCAGCAGC
.
3
149766844
.
C
A
.
3
149766846
.
G
A
.
3
149766847
.
C
A
.
3
149766857
rs556275755
AGCAGCAGCAGCAGCAGCAGCAG
A
.
3
149766871
.
C
A
.