| General information of RDP00551 | |
|---|---|
| Gene Symbol: | NR4A3 |
| RefSeq ID: | NM_006981 |
| Repeat coordinate: | chr9:99822745-99822766 (+) |
| Repeat size: | 7 |
| Repeat region: | intron |
| Repeat unit: | CGG |
| Repeat conservation: | PhastCons_score: 0.974; Repeat Conservation from UCSC Genome Browser |
| Amino acid sequence: | - |
| Gene expression and GO annotation: | BioGPS |
| Protein expression: | Human Protein Altas |
| Gene conservation: | Gene Conservation from UCSC Genome Browser |
| Mapping repeat track to DisGeNET: | |||||
|---|---|---|---|---|---|
| Disease_name | RefSeq | Score | NofPmids | NofSnps | Source |
| Polyarthritis, Juvenile, Rheumatoid Factor Positive | NM_006981 | 0.30 | 1 | 0 | CTD_human |
| Mapping repeat track to 1000 Genomes: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
9
99822745
.
TCGGCGG
TCGGCGGCGG,T
100
| Mapping repeat track to gnomAD: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
9
99822745
rs569354705
TCGGCGGCGG
TCGGCGGCGGCGGCGG,TCGG,TCGGCGG,TCGGCGGCGGCGG,TCGGCGGCGGCGGCGGCGG,T
28513.18
9
99822762
rs535844983
G
GGCGGCA
2976.97
| Mapping repeat track to Kaviar: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
9
99822745
.
TCGG
T
.
9
99822745
.
TCGG
T
.
9
99822745
rs569354705
TCGGCGG
TCGGCGGCGG,T
.
9
99822755
rs113730396
C
T
.
9
99822762
rs535844983
G
A
.
9
99822765
.
G
A
.