| General information of RDP00536 | |
|---|---|
| Gene Symbol: | ATXN7L1 |
| RefSeq ID: | NM_001318229 |
| Repeat coordinate: | chr7:105639146-105639164 (-) |
| Repeat size: | 6 |
| Repeat region: | intron |
| Repeat unit: | CGG |
| Repeat conservation: | PhastCons_score: 0.699; Repeat Conservation from UCSC Genome Browser |
| Amino acid sequence: | - |
| Gene expression and GO annotation: | BioGPS |
| Protein expression: | Human Protein Altas |
| Gene conservation: | Gene Conservation from UCSC Genome Browser |
| Mapping repeat track to gnomAD: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
7
105639145
.
TGCC
T,TGCCGCC,TGCCGCCGCC,TGCCGCCGCCGCC
9672.98
7
105639154
.
C
CGCCGCCGCCGCT
306.46
7
105639155
.
G
A
297.46
7
105639160
.
CGCCGCTGCCGCT
CGCCGCT,C
1655.12
7
105639163
.
C
CGCTGCCGCT
2163
7
105639164
.
G
T
2036.05
| Mapping repeat track to Kaviar: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
7
105639145
.
TGCC
T
.
7
105639145
.
TGCC
T
.
7
105639145
.
TGCCGCCGCC
T,TGCCGCC,TGCCGCTGCC
.
7
105639151
rs189080273
C
T
.
7
105639158
.
G
GC
.
7
105639160
.
C
CG
.