| General information of RDP00534 | |
|---|---|
| Gene Symbol: | RXRB |
| RefSeq ID: | NM_001291989 |
| Repeat coordinate: | chr6:33200319-33200337 (-) |
| Repeat size: | 6 |
| Repeat region: | intron |
| Repeat unit: | CGG |
| Repeat conservation: | PhastCons_score: 0.985; Repeat Conservation from UCSC Genome Browser |
| Amino acid sequence: | - |
| Gene expression and GO annotation: | BioGPS |
| Protein expression: | Human Protein Altas |
| Gene conservation: | Gene Conservation from UCSC Genome Browser |
| Mapping repeat track to DisGeNET: | |||||
|---|---|---|---|---|---|
| Disease_name | RefSeq | Score | NofPmids | NofSnps | Source |
| Mammary Carcinoma, Human | NM_001291989 | 0.30 | 1 | 0 | CTD_human |
| Mapping repeat track to ESP: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
6
33200319
.
ACCG
A
.
| Mapping repeat track to ExAC: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
6
33200319
rs778580219
ACCGCCGCCG
ACCGCCG,ACCGCCGCCGCCG,ACCG,ACCGCCGCCGCCGCCG,A,GCCGCCGCCG
211535.01
6
33200322
rs752973611
G
A,C
117183.21
6
33200327
rs763211632
C
T
4684.73
6
33200328
.
G
A
4843.91
6
33200331
.
G
A
304.15
6
33200333
rs764575259
C
T,CGCCGCT
865.48
6
33200336
.
CGCT
C
376.59
6
33200337
.
G
A
374.20
| Mapping repeat track to gnomAD: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
6
33200319
rs778580219
ACCGCCGCCGCCG
ACCGCCGCCGCCGCCG,A,ACCGCCGCCG,GCCGCCGCCGCCG,ACCGCCGCCGCCGCCGCCG
19282.50
6
33200328
.
G
A
837.42
| Mapping repeat track to Kaviar: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
6
33200319
.
ACCGCCGCCG
A,ACCG,ACCGCCG,ACCGCCGCCGCCG,GCCGCCGCCG
.
6
33200319
rs778632000
ACCG
A
.
6
33200319
rs758231993
ACCGCCG
A
.
6
33200319
rs778036198
ACCGCCGCCG
A
.
6
33200322
rs752973611
G
C
.
6
33200327
rs763211632
C
T
.
6
33200333
rs764575259
C
T
.