| General information of RDP00522 | |
|---|---|
| Gene Symbol: | BRD1 |
| RefSeq ID: | NM_001304808 |
| Repeat coordinate: | chr22:49827361-49827382 (-) |
| Repeat size: | 7 |
| Repeat region: | intron |
| Repeat unit: | CGG |
| Repeat conservation: | PhastCons_score: 0.058; Repeat Conservation from UCSC Genome Browser |
| Amino acid sequence: | - |
| Gene expression and GO annotation: | BioGPS |
| Protein expression: | Human Protein Altas |
| Gene conservation: | Gene Conservation from UCSC Genome Browser |
| Mapping repeat track to DisGeNET: | |||||
|---|---|---|---|---|---|
| Disease_name | RefSeq | Score | NofPmids | NofSnps | Source |
| Schizophrenia | NM_001304808 | 0.50 | 5 | 1 | PSYGENET |
| Mapping repeat track to 1000 Genomes: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
22
49827382
.
G
GCGCCGCCGCCGCCGCCGC
100
| Mapping repeat track to gnomAD: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
22
49827360
.
AGCC
AGCCGCCGCC,A,AGCCGCC,AGCCGCCGCCGCCGCC,AGCCGCCGCCGCC,AGCCGCCGCCGCCGCCGCC
1376477.27
| Mapping repeat track to Kaviar: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
22
49827360
.
AGCC
A
.
22
49827364
.
G
C
.
22
49827372
.
C
CG
.
22
49827374
.
C
T
.
22
49827382
rs564288307
G
GCGCCGCCGCCGCCGCCGC,GC
.