| General information of RDP00518 | |
|---|---|
| Gene Symbol: | CSNK1E |
| RefSeq ID: | NM_001894 |
| Repeat coordinate: | chr22:38317283-38317307 (-) |
| Repeat size: | 8 |
| Repeat region: | intron |
| Repeat unit: | CGG |
| Repeat conservation: | PhastCons_score: 0.368; Repeat Conservation from UCSC Genome Browser |
| Amino acid sequence: | - |
| Gene expression and GO annotation: | BioGPS |
| Protein expression: | Human Protein Altas |
| Gene conservation: | Gene Conservation from UCSC Genome Browser |
| Mapping repeat track to DisGeNET: | |||||
|---|---|---|---|---|---|
| Disease_name | RefSeq | Score | NofPmids | NofSnps | Source |
| Adenocarcinoma of lung (disorder) | NM_001894 | 0.30 | 0 | 0 | UNIPROT |
| Mapping repeat track to gnomAD: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
22
38317282
rs552795135
AGCCGCCGCCGCCGCCGCCGCCGCCGCGCTCCGCTCGGCCCCGGCCGGGCTCTGGCTCTGGGCTCTC
AGCCGCCGCCGCCGCCGCCGCCGCCGCCGCGCTCCGCTCGGCCCCGGCCGGGCTCTGGCTCTGGGCTCTC,A,AGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCGCTCCGCTCGGCCCCGGCCGGGCTCTGGCTCTGGGCTCTC,AGCCGCCGCCGCCGCGCTCCGCTCGGCCCCGGCCGGGCTCTGGCTCTGGGCTCTC,AGCCGCCGCCGCCGCCGCCGCGCTCCGCTCGGCCCCGGCCGGGCTCTGGCTCTGGGCTCTC,AGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCGCTCCGCTCGGCCCCGGCCGGGCTCTGGCTCTGGGCTCTC
276663.03
22
38317287
.
CCGCCGCCGCCGCCGCCGCCGCGCTCCGCTCGGCCCCGGCCGGGCTCTGGCTCTGGGCTCT
C
22469.19
22
38317288
.
C
G
22330.88
22
38317289
.
G
A
15538.90
22
38317291
.
C
T
15517.42
| Mapping repeat track to Kaviar: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
22
38317282
.
AGCCGCCGCCGCCGCCGCCGCCGCCGCGCTCCGCTCGGCCCCGGCCGGGCTCTGGCTCTGGGCTCTCGCCGCCGCCGCCGCCGCCGCCGCCGCCTCCCTCCTCCCGGCCTCCTGCCCGCCCGCCCGCCCCCGCCGCCGGC
AGCCGCCGCCGCCGCCGCCGCCGCCACGCTCCGCTCGGCCCCGGCCGGGCTCTGGCTCTGGGCTCTCGCCGCCGCCGCCGCCGCCGCCGCCGCCTCCCTCCTCCCGGCCTCCTGCCCGCCCGCCCGCCCCCGCCGCCGGC
.