| General information of RDP00513 | |
|---|---|
| Gene Symbol: | RGPD2 |
| RefSeq ID: | NM_001078170 |
| Repeat coordinate: | chr2:86914935-86914953 (+) |
| Repeat size: | 6 |
| Repeat region: | intron |
| Repeat unit: | CGG |
| Repeat conservation: | PhastCons_score: 0.556; Repeat Conservation from UCSC Genome Browser |
| Amino acid sequence: | - |
| Gene expression and GO annotation: | BioGPS |
| Protein expression: | Human Protein Altas |
| Gene conservation: | Gene Conservation from UCSC Genome Browser |
| Mapping repeat track to gnomAD: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
2
86914839
.
ACCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGAGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCGG
GCCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGAGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCGG,A
569359.91
2
86914891
.
ACCTGGCCGGGCGGCGGCGGAGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCGG
A
680490.55
2
86914922
.
TCGACCTGGCCGGGCGGCGGCGGCGGCGG
T
148023.34
2
86914925
.
ACCTGGCCGGGCGGCGGCGGCGGCGGCGG
A
155372.41
2
86914948
.
C
A
7495.53
2
86914949
.
G
C
8601.87
2
86914950
.
G
T
8677.25
2
86914953
.
G
A,GCCTCGA,GCCTCGACCTGGCCGGGCGGCGGCGGCGGCCTCGA
9166.41
| Mapping repeat track to Kaviar: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
2
86914937
.
G
T
.
2
86914947
rs199541312
G
GCCT
.
2
86914949
.
G
C
.
2
86914950
.
G
T
.
2
86914953
.
G
A
.