| General information of RDP00512 | |
|---|---|
| Gene Symbol: | RGPD2 |
| RefSeq ID: | NM_001078170 |
| Repeat coordinate: | chr2:86914849-86914885 (+) |
| Repeat size: | 12 |
| Repeat region: | intron |
| Repeat unit: | CGG |
| Repeat conservation: | PhastCons_score: 0.651; Repeat Conservation from UCSC Genome Browser |
| Amino acid sequence: | - |
| Gene expression and GO annotation: | BioGPS |
| Protein expression: | Human Protein Altas |
| Gene conservation: | Gene Conservation from UCSC Genome Browser |
| Mapping repeat track to gnomAD: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
2
86914693
.
CGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCCTCCACCTGGACGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGA
AGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCCTCCACCTGGACGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGA,C
70419.67
2
86914699
.
CGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCCTCCACCTGGACGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGA
C
13974.16
2
86914702
.
CGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCCTCCACCTGGACGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGA
C
15980.26
2
86914724
.
CGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCCTCCACCTGGACGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGAGGCGGCGGCCTCGACCTGGCCG
C
232347.63
2
86914727
.
CGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCCTCCACCTGGACGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGAGGCGGCGGCCTCGACCTGGCCG
C
223449.29
2
86914730
.
CGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCCTCCACCTGGACGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGA
C
169245.88
2
86914733
.
CGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCCTCCACCTGGACGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGA
C
193235.77
2
86914742
.
CGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCCTCCACCTGGACGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGA
C
183621.50
2
86914745
.
CGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCCTCCACCTGGACGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGA
CCTGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCCTCCACCTGGACGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGA,CCTGGCCTAAGGTACTTCTGTTGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCCTCCACCTGGACGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGA,CCTGGCCTAAGGTACTTCTGTTGGGGAATATTGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCCTCCACCTGGACGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGA,CCTGGCCTAAGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCCTCCACCTGGACGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGA,C
179216.12
2
86914770
.
CGGCGGCGGCGGCGGCCTCCACCTGGACGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGAGGCGGCGGCCTCGACCTGGCCG
CGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGAGGCGGCGGCCTCGACCTGGCCG,C
225638.84
2
86914779
.
CGGCGGCCTCCACCTGGACGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGA
C
573985.58
2
86914782
.
CGGCCTCCACCTGGACGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGA
C
545646.71
2
86914825
.
CGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGA
C
514036.42
2
86914839
.
ACCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGAGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCGG
GCCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGAGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCGG,A
569359.91
2
86914847
.
GGGCGGCGGCGGCGGCGGCGGCGGC
GGGCGGCGGCGGCGGCGGCGGC,G,GGGCGGC,GGGCGGCGGCGGCGGC,GGGCGGCGGCGGC
538875.33
2
86914850
.
CGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGAGGCGGCGGCCTCGACCTGGCCG
C
600164.40
2
86914853
.
CGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGAGGCGGCGGCCTCGACCTGGCCG
C
586223.24
2
86914859
.
CGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGA
C
595169.93
2
86914862
.
CGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGAGGCGGCGGCCTCGACCTGGCCG
C
611150.91
2
86914865
.
CGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGA
C
588539.76
2
86914868
rs866810387
CGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGA
C
602837.59
2
86914875
.
G
C
610175.80
2
86914876
.
G
T
609795.70
2
86914877
.
CGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGA
C
612976.29
2
86914878
.
G
T
614276.60
2
86914880
.
CGG
C
591569.85
2
86914881
.
G
C
593576.85
2
86914882
.
G
T
595330.66
2
86914883
.
CG
C
592708.60
2
86914884
rs868540663
G
C,GGCC
623112.75
| Mapping repeat track to Kaviar: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
2
86914847
.
GGGC
G
.
2
86914868
.
C
CGACCTGGCCG
.
2
86914868
.
CGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGA
C
.