| General information of RDP00511 | |
|---|---|
| Gene Symbol: | RGPD2 |
| RefSeq ID: | NM_001078170 |
| Repeat coordinate: | chr2:86914800-86914833 (+) |
| Repeat size: | 11 |
| Repeat region: | intron |
| Repeat unit: | CGG |
| Repeat conservation: | PhastCons_score: 0.866; Repeat Conservation from UCSC Genome Browser |
| Amino acid sequence: | - |
| Gene expression and GO annotation: | BioGPS |
| Protein expression: | Human Protein Altas |
| Gene conservation: | Gene Conservation from UCSC Genome Browser |
| Mapping repeat track to gnomAD: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
2
86914644
.
GGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCCTCCACCTGGACGGGCGGC
GGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCCTCCACCTGGACGGGCGGC,GGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCCTCCACCTGGACGGGCGGC,GGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCCTCCACCTGGACGGGCGGC,GGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCCTCCACCTGGACGGGCGGC,G,GGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCCTCCACCTGGACGGGCGGC
31254.32
2
86914693
.
CGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCCTCCACCTGGACGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGA
AGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCCTCCACCTGGACGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGA,C
70419.67
2
86914699
.
CGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCCTCCACCTGGACGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGA
C
13974.16
2
86914702
.
CGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCCTCCACCTGGACGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGA
C
15980.26
2
86914713
.
ACCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCCTCCACCTGGACGGGCGGCGGCGGCGGCGGCGGC
A
41651.81
2
86914721
.
GGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCCTCCACCTGGACGGGCGGCGGCGGCGGCGGC
GGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCCTCCACCTGGACGGGCGGCGGCGGCGGCGGC,GGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCCTCCACCTGGACGGGCGGCGGCGGCGGCGGC,GGGCGGCGGCGGCGGC,G
29065.63
2
86914724
.
CGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCCTCCACCTGGACGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGAGGCGGCGGCCTCGACCTGGCCG
C
232347.63
2
86914727
.
CGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCCTCCACCTGGACGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGAGGCGGCGGCCTCGACCTGGCCG
C
223449.29
2
86914730
.
CGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCCTCCACCTGGACGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGA
C
169245.88
2
86914733
.
CGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCCTCCACCTGGACGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGA
C
193235.77
2
86914742
.
CGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCCTCCACCTGGACGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGA
C
183621.50
2
86914745
.
CGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCCTCCACCTGGACGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGA
CCTGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCCTCCACCTGGACGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGA,CCTGGCCTAAGGTACTTCTGTTGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCCTCCACCTGGACGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGA,CCTGGCCTAAGGTACTTCTGTTGGGGAATATTGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCCTCCACCTGGACGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGA,CCTGGCCTAAGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCCTCCACCTGGACGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGA,C
179216.12
2
86914767
.
GGGCGGCGGCGGCGGCGGCCTCCACCTGGACGGGCGGCGGCGGCGGCGGC
GGGC,GGGCGGCGGCGGCGGC,GGGCGGCGGCGGCGGCGGCGGCCTCCACCTGGACGGGCGGCGGCGGCGGCGGC,G
198635.94
2
86914770
.
CGGCGGCGGCGGCGGCCTCCACCTGGACGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGAGGCGGCGGCCTCGACCTGGCCG
CGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGAGGCGGCGGCCTCGACCTGGCCG,C
225638.84
2
86914779
.
CGGCGGCCTCCACCTGGACGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGA
C
573985.58
2
86914782
.
CGGCCTCCACCTGGACGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGA
C
545646.71
2
86914798
rs551941000
GGGCGGCGGCGGCGGCGGC
G,GGGCGGCGGCGGCGGC,GGGCGGCGGCGGC
670330.84
2
86914817
.
G
C
517798.90
2
86914818
.
G
T
513151.61
2
86914825
.
CGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGACCTGGCCGGGCGGCGGCGGA
C
514036.42
2
86914826
.
G
T
514055.56
| Mapping repeat track to Kaviar: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
2
86914798
rs551941000
GGGC
G
.
2
86914798
.
GGGCGGC
G,GGGC
.
2
86914816
.
C
CCTCGACCTGGCCG
.