| General information of RDP00499 | |
|---|---|
| Gene Symbol: | RGPD2 |
| RefSeq ID: | NM_001078170 |
| Repeat coordinate: | chr2:86914133-86914160 (+) |
| Repeat size: | 9 |
| Repeat region: | intron |
| Repeat unit: | CGG |
| Repeat conservation: | PhastCons_score: 0.005; Repeat Conservation from UCSC Genome Browser |
| Amino acid sequence: | - |
| Gene expression and GO annotation: | BioGPS |
| Protein expression: | Human Protein Altas |
| Gene conservation: | Gene Conservation from UCSC Genome Browser |
| Mapping repeat track to gnomAD: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
2
86913966
rs745749142
GGTGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCCTCGGCCTCGGCCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGGCCTCGGCCCCGGCCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGGCCCCGGCCTGGCCGGGC
G
663.81
2
86913976
.
ACCTGGCCGGGCGGCGGCGGCGGCCTCGGCCTCGGCCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGGCCTCGGCCCCGGCCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGGCCCCGGCCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGGCCTCGGCCTGGCCGGACGGCGGCGGCGGCCTCGGCCTGGCCGGGCGGCGGCGGCGGCCTCGG
GCCTGGCCGGGCGGCGGCGGCGGCCTCGGCCTCGGCCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGGCCTCGGCCCCGGCCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGGCCCCGGCCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGGCCTCGGCCTGGCCGGACGGCGGCGGCGGCCTCGGCCTGGCCGGGCGGCGGCGGCGGCCTCGG,A,ACCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGGCCTCGGCCTGGCCGGACGGCGGCGGCGGCCTCGGCCTGGCCGGGCGGCGGCGGCGGCCTCGG
2316.76
2
86914114
.
TCGGCCCCGGCCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGGCCTCGGCCTGGCCGGACGGCGGCGG
TCGGCCTCGGCCTCGGCCTGGCCGGACGGCGGCGG,T
59909.47
2
86914127
.
GGCCGGGC
G
14317.43
2
86914131
.
GGGCGGC
GGGC,G,GGGCGGCGGC,GGGCGGCGGCGGCGGC,GGGCGGCGGCGGC
84347.42
2
86914137
.
C
CGGCGGCGGCGGCGGCGGCGGCGGCCTCGGCCTCGGCCTGGCCG
23286.63
2
86914140
.
C
CGGCGGCGGCGGCGGCGGCGGCCTCGGCCTCGGCCTGGCCG
4854.14
2
86914145
.
G
A
13713.49
2
86914148
.
GCGGCGGCGGCGGCCTCGGCCTCGGCCTGGCCGGA
GCGGCGGCGGCGGCCTCGGCCTCGGCCTGGCCGGACGGCGGCGGCGGCCTCGGCCTCGGCCTGGCCGGA,GCGGCGGCGGCGGCCTCGGCCTCGGCCTGGCCGGACGGCGGCGGCGGCCTCGGCCTCGGCCTGGCCGGACGGCGGCGGCGGCCTCGGCCTCGGCCTGGCCGGA,ACGGCGGCGGCGGCCTCGGCCTCGGCCTGGCCGGA,G
17476.18
2
86914156
.
G
C
2975.72
2
86914157
.
G
T
16115.59
2
86914158
.
C
T
2234.30
2
86914160
.
GCCT
G
13898.16
| Mapping repeat track to Kaviar: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
2
86914131
.
GGGC
G
.
2
86914134
rs185548196
C
G
.
2
86914157
.
G
GCGGCCT
.