| General information of RDP00498 | |
|---|---|
| Gene Symbol: | RGPD2 |
| RefSeq ID: | NM_001078170 |
| Repeat coordinate: | chr2:86914084-86914111 (+) |
| Repeat size: | 9 |
| Repeat region: | intron |
| Repeat unit: | CGG |
| Repeat conservation: | PhastCons_score: 0.003; Repeat Conservation from UCSC Genome Browser |
| Amino acid sequence: | - |
| Gene expression and GO annotation: | BioGPS |
| Protein expression: | Human Protein Altas |
| Gene conservation: | Gene Conservation from UCSC Genome Browser |
| Mapping repeat track to gnomAD: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
2
86913966
rs745749142
GGTGGCCTCGACCTGGCCGGGCGGCGGCGGCGGCCTCGGCCTCGGCCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGGCCTCGGCCCCGGCCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGGCCCCGGCCTGGCCGGGC
G
663.81
2
86913976
.
ACCTGGCCGGGCGGCGGCGGCGGCCTCGGCCTCGGCCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGGCCTCGGCCCCGGCCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGGCCCCGGCCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGGCCTCGGCCTGGCCGGACGGCGGCGGCGGCCTCGGCCTGGCCGGGCGGCGGCGGCGGCCTCGG
GCCTGGCCGGGCGGCGGCGGCGGCCTCGGCCTCGGCCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGGCCTCGGCCCCGGCCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGGCCCCGGCCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGGCCTCGGCCTGGCCGGACGGCGGCGGCGGCCTCGGCCTGGCCGGGCGGCGGCGGCGGCCTCGG,A,ACCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGGCCTCGGCCTGGCCGGACGGCGGCGGCGGCCTCGGCCTGGCCGGGCGGCGGCGGCGGCCTCGG
2316.76
2
86913984
rs369152998
GGGCGGCGGCGGCGGCCTCGGCCTCGGCCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGGCCTCGGCCCCGGCCTGGCCGGGCGGCGGCGGCGGC
GGGCGGCGGCCTCGGCCTCGGCCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGGCCTCGGCCCCGGCCTGGCCGGGCGGCGGCGGCGGC,GGGCGGCGGCGGCGGCGGCCTCGGCCTCGGCCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGGCCTCGGCCCCGGCCTGGCCGGGCGGCGGCGGCGGC,G,GGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGGCCTCGGCCCCGGCCTGGCCGGGCGGCGGCGGCGGC,GGGCGGCGGCGGCCTCGGCCTCGGCCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGGCCTCGGCCCCGGCCTGGCCGGGCGGCGGCGGCGGC,GGGCGGCGGCGGCGGCCTCGGCCTCGGCCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGGCCTCGGCCCCGGCCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCCTCGGCCTCGGCCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGGCCTCGGCCCCGGCCTGGCCGGGCGGCGGCGGCGGC
34270.10
2
86914007
rs868304273
TCGGCCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGGCCTCGGCCCCGGCCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGGCCC
T,CCGGCCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGGCCTCGGCCCCGGCCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGGCCC,TCGGCCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGGCCC,TCGGCCTCGGCCTCGGCCCCGGCCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGGCCC
66117.21
2
86914021
.
CGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGGCCTCGGCCCCGGCCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGGCCCCGGCCTGGCCG
C,AGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGGCCTCGGCCCCGGCCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGGCCCCGGCCTGGCCG,CCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGGCCTCGGCCCCGGCCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGGCCCCGGCCTGGCCG
886500.17
2
86914024
.
CGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGGCCTCGGCCCCGGCCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGGCCCCGGCCTGGCCG
C
859594.12
2
86914027
.
CGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGGCCTCGGCCCCGGCCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGGCCCCGGCCTGGCCG
C,CGGCGGCCTCGGCCTCGGCCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGGCCTCGGCCCCGGCCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGGCCCCGGCCTGGCCG,CGGCGGCGGCGGCGGCGGCCTCGGCCTCGGCCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGGCCTCGGCCCCGGCCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGGCCCCGGCCTGGCCG
782451.70
2
86914030
.
CGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGGCCTCGGCCCCGGCCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGGCCCCGGCCTGGCCG
C
151632.12
2
86914033
.
CGGCGGCGGCGGCGGCGGCGGCGGCCTCGGCCTCGGCCCCGGCCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGGCCCCGGCCTGGCCG
CGGCCTCGGCCTCCGCCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCCTCGGCCTCGGCCCCGGCCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGGCCCCGGCCTGGCCG,C,CCTGGCGGCGGCGGCGGCGGCGGCGGCCTCGGCCTCGGCCCCGGCCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGGCCCCGGCCTGGCCG,CGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGGCCCCGGCCTGGCCG,CCTCGGCCTCCGCCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCCTCGGCCTCGGCCCCGGCCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGGCCCCGGCCTGGCCG
96838.24
2
86914059
.
TCGGCCTCGGCCCCGGCCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGG
T,GCGGCCTCGGCCCCGGCCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGG
66602.11
2
86914065
.
TCGGCCCCGGCCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGGCCC
T,TCGGCCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGGCCC,CCGGCCCCGGCCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGGCCC,GCGGCCCCGGCCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGGCCC
73044.28
2
86914072
.
CGGCCTGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGGCCCCGGCCTG
CGGCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCTCGGCCCCGGCCTG,C
49542.27
2
86914082
.
GGGCGGCGGCGGC
GGGCGGCGGCGGCGGCGGCGGC,GGGCGGCGGC,GGGCGGC,G,GGGC
85024.24
2
86914088
.
CGGCGGCGGCGGCGGCGGCGGCGGCCTCGGCCCCGGCCTGGCCG
C
67667.60
2
86914091
.
CGGCGGCGGCGGCGGCGGCGGCCTCGGCCCCGGCCTGGCCG
C
41876.02
2
86914099
.
G
A
17600.95
2
86914100
.
CGGCGGCGGCGGCCTCGGCCCCGGCCTGGCCG
C
17744
2
86914101
.
G
C
18225.72
2
86914102
rs866970585
G
A,T
82380.97
2
86914107
rs867371773
G
C
21845.35
2
86914108
rs866439923
G
T
47557.22
| Mapping repeat track to Kaviar: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
2
86914082
.
GGGCGGCGGCGGC
G
.