| General information of RDP00489 | |
|---|---|
| Gene Symbol: | RGPD1 |
| RefSeq ID: | NM_001024457 |
| Repeat coordinate: | chr2:87825374-87825395 (-) |
| Repeat size: | 7 |
| Repeat region: | intron |
| Repeat unit: | CGG |
| Repeat conservation: | PhastCons_score: 0.003; Repeat Conservation from UCSC Genome Browser |
| Amino acid sequence: | - |
| Gene expression and GO annotation: | BioGPS |
| Protein expression: | Human Protein Altas |
| Gene conservation: | Gene Conservation from UCSC Genome Browser |
| Mapping repeat track to gnomAD: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
2
87825367
.
CGCCGAGGCCGCCGCCGCCGCCGCCGCCGCCCGGCCAGGCCGAG
C
64460.90
2
87825373
.
GGCCGCCGCCGCCGCCGCCGCCGCCCGGCCAGGCCGAGGCCGAGGCC
GGCCGCCGCCGCCGCCGCCCGGCCAGGCCGAGGCCGAGGCC,GGCCGCCGCCGCCGCCGCCGCCCGGCCAGGCCGAGGCCGAGGCC,GGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCCGGCCAGGCCGAGGCCGAGGCC,G,GGCCGCCGCCGCCGCCGCCGCCGCCGCCCGGCCAGGCCGAGGCCGAGGCC
171428.04
2
87825376
.
CGCCGCCGCCGCCGCCGCCGCCCGGCCAGGCCGAGGCCGAG
C,CGCCGCCGCCGCCGCCGCCGCCCGGCCAGGCCGAGGCCGAGGCCGCCGCCGCCGCCGCCGCCCGGCCAGGCCGAGGCCGAG
146786.26
2
87825379
.
CGCCGCCGCCGCCGCCGCCCGGCCAGGCCGAG
C
138559.25
2
87825380
.
G
C
92920.12
2
87825382
.
CG
C
93003.76
2
87825384
.
CCGCCGCCGCCGCCCGGCCAGGCCGAGGCCGAGGCCGCCGCCGCCGCCGCCGCCGCCGCCCGGCCAGGCCGAGGCCGAGGCCGAGGCCGCCGTCGCCGCCGCCGCCGCCCGGCCGAGGCCGA
C
86942.47
2
87825385
.
C
CGCCGCCGCCGCCCGGCCAGGCCGAGGCCGAG
86800.93
2
87825388
.
C
T
87178.34
| Mapping repeat track to Kaviar: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
2
87825373
.
GGCCGCC
G
.
2
87825373
.
GGCCGCCGCC
G
.
2
87825382
.
C
CCGGCCAG
.