| General information of RDP00487 | |
|---|---|
| Gene Symbol: | RGPD1 |
| RefSeq ID: | NM_001024457 |
| Repeat coordinate: | chr2:87824863-87824887 (-) |
| Repeat size: | 8 |
| Repeat region: | intron |
| Repeat unit: | CGG |
| Repeat conservation: | PhastCons_score: 0.000; Repeat Conservation from UCSC Genome Browser |
| Amino acid sequence: | - |
| Gene expression and GO annotation: | BioGPS |
| Protein expression: | Human Protein Altas |
| Gene conservation: | Gene Conservation from UCSC Genome Browser |
| Mapping repeat track to gnomAD: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
2
87824782
.
GGCCGAGGCCGAGGCCGCCGCCGCCGCCGCCCGGCCAGGCCGAGGCCGCCGCCGCCGCCGCCCGGCCAGGCCGAGGCCGAGGCC
GGCCGCCGCCGCCGCCCGGCCAGGCCGAGGCCGCCGCCGCCGCCGCCCGGCCAGGCCGAGGCCGAGGCC,G
108511.58
2
87824825
.
GGCCGCCGCCGCCGCCGCCCGGCCAGGCCGAGGCCGAGGCCGCC
GGCCGCCGCCGCCGCCGCCCGGCCAGGCCGAGGCCGCCGCCGCCGCCGCCGCCCGGCCAGGCCGAGGCCGAGGCCGCC,GGCC,G,GGCCGCCGCCGCCGCCGCCGCCGCCCGGCCAGGCCGAGGCCGAGGCCGCC,GGCCGCCGCCGCCGCCGCCGCCCGGCCAGGCCGAGGCCGAGGCCGCC
19298.05
2
87824850
.
GGCCGAGGCCGAGGCCGCCGCC
G
11167.11
2
87824856
.
GGCCGAGGCCGCCGCCGCCGCCGCC
G,GGCC,GGCCGCCGCCGCC,GGCCGCCGCC
18820.58
2
87824862
rs533529835
GGCCGCCGCC
GGCCGCCGCCGCC,GGCCGCC,CGCCGCCGCC,G,GGCCGCCGCCGCCGCC
141873.03
2
87824864
.
C
T
38492.90
2
87824865
.
C
CGAGGCCGAG,CGCG
39314.77
2
87824867
.
C
A
9340.97
2
87824868
.
C
G,CGCCGCCCGGCCAGGCCGAGGCCGAG
9598.88
2
87824871
.
C
CGCCCGGCCAGGCCGAGGCCGAG
5979.51
2
87824874
.
C
CGCA
2612.58
2
87824876
.
C
A
2217.26
2
87824880
.
C
T
1657.58
| Mapping repeat track to Kaviar: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
2
87824862
rs770236650
GGCC
G
.
2
87824883
.
CGCCGCA
TAACTTAG
.
2
87824884
.
GCCGCA
ACTTAG
.