General information of RDP00483 | |
---|---|
Gene Symbol: | AFF3 |
RefSeq ID: | NM_001025108 |
Repeat coordinate: | chr2:100104799-100104823 (-) |
Repeat size: | 8 |
Repeat region: | intron |
Repeat unit: | CGG |
Repeat conservation: | PhastCons_score: 0.083; Repeat Conservation from UCSC Genome Browser |
Amino acid sequence: | - |
Gene expression and GO annotation: | BioGPS |
Protein expression: | Human Protein Altas |
Gene conservation: | Gene Conservation from UCSC Genome Browser |
Mapping repeat track to DisGeNET: | |||||
---|---|---|---|---|---|
Disease_name | RefSeq | Score | NofPmids | NofSnps | Source |
Prescription Drug Abuse | NM_001025108 | 0.30 | 1 | 0 | CTD_human |
Mapping repeat track to gnomAD: |
---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
2
100104780
.
GGCCCGGCCCGCTGCTGCAGCCGCCGCCGCC
G
446.89
2
100104787
.
CCCGCTGCTGCAGCCGCCGCCG
C
1684.89
2
100104798
rs868237291
AGCCGCCGCCGCC
A,AGCCGCCGCCGCCGCCGCCGCC,AGCCGCCGCCGCCGCCGCC,AGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCC,AGCC,AGCCGCCGCCGCCGCCGCCGCCGCCGCCGCC
2046777.45
2
100104801
.
C
A
1351226.77
2
100104808
.
G
A
835188.33
2
100104809
.
C
T
828038.53
2
100104811
.
G
A
716.37
2
100104821
.
C
T
205.47
2
100104823
.
G
GC
617.19
Mapping repeat track to Kaviar: |
---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
2
100104798
.
AGCCGCCGCC
A,AGCCGCCGCCGCCGCCGCC
.
2
100104798
.
AGCCGCCGCCGCC
A,AGCC
.