| General information of RDP00481 | |
|---|---|
| Gene Symbol: | MAP1S |
| RefSeq ID: | NM_018174 |
| Repeat coordinate: | chr19:17719700-17719721 (+) |
| Repeat size: | 7 |
| Repeat region: | intron |
| Repeat unit: | CGG |
| Repeat conservation: | PhastCons_score: 0.056; Repeat Conservation from UCSC Genome Browser |
| Amino acid sequence: | - |
| Gene expression and GO annotation: | BioGPS |
| Protein expression: | Human Protein Altas |
| Gene conservation: | Gene Conservation from UCSC Genome Browser |
| Mapping repeat track to 1000 Genomes: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
19
17719698
.
GGGCGGCGGC
GGGCGGC,G
100
| Mapping repeat track to gnomAD: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
19
17719698
rs764073731
GGGCGGCGGCGGCGGC
GGGCGGCGGCGGC,GGGCGGCGGC,GGGCGGC,GGGCGGCGGCGGCGGCGGC,G
5577350.73
19
17719703
.
G
C
2894492.28
19
17719704
.
C
T
2894556.55
19
17719710
.
C
T
6885.57
19
17719719
.
C
T
443.47
| Mapping repeat track to Kaviar: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
19
17719695
.
GTGGGGC
GTGG
.
19
17719698
.
GGGC
G
.
19
17719698
.
GGGCGGCGGC
G
.
19
17719698
rs531398234
GGGC
G
.
19
17719698
rs532600669
GGGCGGCGGC
G,GGGCGGC
.
19
17719699
.
GGCGGC
GGC
.
19
17719703
.
G
T
.
19
17719707
.
C
G
.