| General information of RDP00422 | |
|---|---|
| Gene Symbol: | INPP4B |
| RefSeq ID: | NM_001101669 |
| Repeat coordinate: | chr4:142845728-142845755 (-) |
| Repeat size: | 9 |
| Repeat region: | intron |
| Repeat unit: | CCG |
| Repeat conservation: | PhastCons_score: 0.006; Repeat Conservation from UCSC Genome Browser |
| Amino acid sequence: | - |
| Gene expression and GO annotation: | BioGPS |
| Protein expression: | Human Protein Altas |
| Gene conservation: | Gene Conservation from UCSC Genome Browser |
| Mapping repeat track to DisGeNET: | |||||
|---|---|---|---|---|---|
| Disease_name | RefSeq | Score | NofPmids | NofSnps | Source |
| Liver carcinoma | NM_001101669 | 0.32 | 1 | 0 | CTD_human |
| Mapping repeat track to 1000 Genomes: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
4
142845728
.
CCGGCGGCGGCGGCGG
ACGGCGGCGGCGGCGG,C
100
| Mapping repeat track to gnomAD: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
4
142845728
rs536967003
CCGGCGGCGGCGGCGG
CCGGCGGCGGCGGCGGCGG,C,CCGGCGGCGGCGG,CCGGCGG,CCGGCGGCGG,CCGGCGGCGGCGGCGGCGGCGG
1046034.71
4
142845729
rs66916429
C
CGGT
125092.81
4
142845731
.
G
C
126277.77
4
142845736
.
G
C
41483.04
4
142845737
.
G
C
41800.64
4
142845743
.
G
A
34527.98
4
142845745
.
G
GGCGGCGGCGGCA
172.47
4
142845748
.
G
A
354.46
4
142845754
.
G
A
660.13
| Mapping repeat track to Kaviar: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
4
142845728
.
CCGG
C
.
4
142845728
.
CCGGCGGCGGCGGCGG
ACGGCGGCGGCGGCGG,C
.
4
142845728
rs761660833
CCGG
CCGGCGG,C
.
4
142845728
.
CCGGCGG
C
.
4
142845728
rs576052340
CCGGCGGCGGCGGCGG
C
.
4
142845729
rs66916429
C
CCGG,CGGC
.
4
142845744
rs548580778
C
G
.
4
142845753
rs570066296
C
G
.