| General information of RDP00418 | |
|---|---|
| Gene Symbol: | PPP2R5C |
| RefSeq ID: | NM_001352914 |
| Repeat coordinate: | chr14:101761688-101761715 (+) |
| Repeat size: | 9 |
| Repeat region: | intron |
| Repeat unit: | CCG |
| Repeat conservation: | PhastCons_score: 0.027; Repeat Conservation from UCSC Genome Browser |
| Amino acid sequence: | - |
| Gene expression and GO annotation: | BioGPS |
| Protein expression: | Human Protein Altas |
| Gene conservation: | Gene Conservation from UCSC Genome Browser |
| Mapping repeat track to DisGeNET: | |||||
|---|---|---|---|---|---|
| Disease_name | RefSeq | Score | NofPmids | NofSnps | Source |
| Familial Nonmedullary Thyroid Cancer | NM_001352914 | 0.30 | 1 | 0 | CTD_human |
| Mapping repeat track to gnomAD: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
14
101761677
.
ACGCCGCCGCTGC
ACGCCGCCGCCGCTGC,ACGCCGCCGCTGCCGCCGCCGCTGC,ACGCCGCCGCTGCCGCCGCCGCCGCTGC,ACGCCGCCGCTGCCGCCGCCGCCGCCGCTGC,A
2609.22
14
101761687
.
TGCCGCCGCCGCC
TGCCGCCGCC,TGCCGCC,TGCCGCCGCCGCCGCCGCC,T,TGCCGCCGCCGCCGCC,CGCCGCCGCCGCC
112172.32
14
101761689
.
C
T
62447.74
14
101761690
.
C
T
60648.39
14
101761699
.
C
T
51639.78
14
101761708
.
C
T
398.33
14
101761713
.
C
CCGT
1060.64
| Mapping repeat track to Kaviar: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
14
101761687
.
TGCCGCCGCCGCC
T
.
14
101761699
.
C
T
.