| General information of RDP00411 | |
|---|---|
| Gene Symbol: | ARHGEF3 |
| RefSeq ID: | NM_001128615 |
| Repeat coordinate: | chr3:56789022-56789067 (-) |
| Repeat size: | 15 |
| Repeat region: | intron |
| Repeat unit: | CAG |
| Repeat conservation: | PhastCons_score: 0.002; Repeat Conservation from UCSC Genome Browser |
| Amino acid sequence: | - |
| Gene expression and GO annotation: | BioGPS |
| Protein expression: | Human Protein Altas |
| Gene conservation: | Gene Conservation from UCSC Genome Browser |
| Mapping repeat track to gnomAD: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
3
56789020
rs539946111
ATGCTGCTGCTGCTGC
ATGCTGCTGCTGCTGCTGCTGC,ATGCTGCTGCTGCTGCTGC,ATGCTGCTGCTGC,A,ATGCTGC,ATGCTGCTGC
5830068.27
3
56789023
rs149704831
C
A
3209115.57
3
56789025
.
G
GCTT
2266886.50
3
56789026
.
C
A
2266887.17
3
56789029
.
C
A
1932071.03
3
56789033
.
TG
T
1489537.22
3
56789045
.
T
G
23315.52
3
56789052
.
G
GCTT,A
6030.75
3
56789067
.
G
A
240.56
| Mapping repeat track to Kaviar: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
3
56789020
rs60816195
ATGC
A,ATGCTGC,ATGCTGCTGC
.
3
56789020
.
ATGCTGC
A,ATGC,ATGCTGCTGCTGC
.
3
56789020
rs60414325
ATGCTGCTGC
A,ATGC,ATGCTGC,ATGCTGCTGCTGC,ATGCTGCTGCTGCTGC
.
3
56789020
.
ATGCTGCTGCTGC
A
.
3
56789020
.
ATGCTGCTGCTGCTGC
A,ATGCTGC,ATGCTGCTGCTGC,ATGCTGCTGCTGCTGCTGC,ATGCTGCTGCTGCTGCTGCTGC
.
3
56789020
.
ATGCTGCTGCTGCTGCTGC
A
.
3
56789020
.
ATGCTGCTGCTGCTGCTGCTGCTGC
A
.
3
56789020
.
ATGCTGCTGCTGCTGCTGCTGCTGCTGC
A
.
3
56789021
.
TGCTGCTGCTGCTGCTGCTGCTGCTGCT
T
.
3
56789023
rs149704831
C
A
.
3
56789047
.
C
T
.
3
56789052
.
G
A
.