| General information of RDP00389 | |
|---|---|
| Gene Symbol: | MTMR1 |
| RefSeq ID: | NM_001306144 |
| Repeat coordinate: | chrX:150693540-150693561 (+) |
| Repeat size: | 7 |
| Repeat region: | CDS |
| Repeat unit: | CGG |
| Repeat conservation: | PhastCons_score: 0.112; Repeat Conservation from UCSC Genome Browser |
| Amino acid sequence: | AAAAAA |
| Gene expression and GO annotation: | BioGPS |
| Protein expression: | Human Protein Altas |
| Gene conservation: | Gene Conservation from UCSC Genome Browser |
| Mapping repeat track to 1000 Genomes: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
X
150693540
.
CCGG
C
100
| Mapping repeat track to ExAC: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
X
150693540
rs782326539
CCGG
C
11543.60
X
150693547
.
C
T
38.43
| Mapping repeat track to gnomAD: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
X
150693540
rs782326539
CCGGCGGCGG
CCGGCGGCGGCGG,CCGGCGG,C,CCGGCGGCGGCGGCGG
22340.62
X
150693550
.
C
A
324.87
X
150693557
.
G
A
540.02
| Mapping repeat track to Kaviar: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
X
150693528
.
GCCATGGACAGGCCGGCGGCGGC
G
.
X
150693540
.
CCGG
C
.
X
150693543
.
GCGGCGGC
G
.
X
150693544
.
CGGC
C
.
X
150693547
.
CGGCGGCGGCGGCGGGCTGCGA
C
.
X
150693548
.
GGCGGC
G
.
X
150693548
.
GGCGGCGGCGGCGGGCTGCGAGGGCGGC
G
.
X
150693550
.
CGG
C
.
X
150693551
.
GGCGGCGGCGGGCTGCGAGGGC
G
.
X
150693553
.
CGG
C
.
X
150693553
.
CGGC
C
.
X
150693554
.
GGCGG
G
.
X
150693554
.
GGCGGCGGGCTGCGAGGGCGGCGGGGG
G
.
X
150693554
.
GGCGGCGGGCTGCGAGGGCGGCGGGGGCCCGAACCCGGGGCCGGCGGGCGGCAGGAGGCCTCCTCGGGCCGCGGGGGGCGCCACC
G
.
X
150693554
.
GGCGGCGGGCTGCGAGGGCGGCGGGGGCCCGAACCCGGGGCCGGCGGGCGGCAGGAGGCCTCCTCGGGCCGCGGGGGGCGCCACCGCCGGCTCCCGGCAGCCCAGCGTGGAGACCCTGGACAGGTAAGC
G
.
X
150693556
.
CGG
C
.
X
150693556
.
CGGCGGGCTGCGAGGGCGGC
C
.
X
150693556
.
CGGCGGGCTGCGAGGGCGGCGGGGGCCCGAACCCGGGG
C
.
X
150693556
.
CGGCGGGCTGCGAGGGCGGCGGGGGCCCGAACCCGGGGCCGGCGGGCGGCAGGAGG
C
.
X
150693557
.
GGCGGGCTGCGAGGGCGGCGGGGGCCCGAACCCGGGGCCGGCGGGCGGCAGGAGGCCTCCTCGGGC
G
.
X
150693557
.
GGCGGGCTGCGAGGGCGGCGGGGGCCCGAACCCGGGGCCGGCGGGCGGCAGGAGGCCTCCTCGGGCCGCGGGGGGCGCCACCGCCGGCT
G
.
X
150693557
.
GGCGGGCTGCGAGGGCGGCGGGGGCCCGAACCCGGGGCCGGCGGGCGGCAGGAGGCCTCCTCGGGCCGCGGGGGGCGCCACCGCCGGCTCCCGGCAGCCCAGCGTGGAGACCCTGGACAGGTAAGCGGGGCCCGGGCT
G
.
X
150693557
.
GGCGGGCTGCGAGGGCGGCGGGGGCCCGAACCCGGGGCCGGCGGGCGGCAGGAGGCCTCCTCGGGCCGCGGGGGGCGCCACCGCCGGCTCCCGGCAGCCCAGCGTGGAGACCCTGGACAGGTAAGCGGGGCCCGGGCTGCCCCGGCCTCCCGCGCCCCGACTCCCGAGGGCCCCGCGCGAGGCC
G
.
X
150693558
.
GCGGGCTGCGA
G
.
X
150693558
.
GCGGGCTGCGAGG
G
.
X
150693558
.
GCGGGCTGCGAGGGCGGCGGGGGCCC
G
.
X
150693559
.
CGGGCTGCGAGGGCGGCGGGGGCC
C
.
X
150693559
.
CGGGCTGCGAGGGCGGCGGGGGCCCGAACCCGGGGCCGGCGGGCGGCAGG
C
.
X
150693560
.
GGGCTGCGAGGGCGGCGGGGG
G
.
X
150693560
.
GGGCTGCGAGGGCGGCGGGGGCCCGAACCCGGGGCCGGCGGGCGGCAGGAGGCCTCCTCGGG
G
.
X
150693560
.
GGGCTGCGAGGGCGGCGGGGGCCCGAACCCGGGGCCGGCGGGCGGCAGGAGGCCTCCTCGGGCCGCGGGGGGCGCCACCGCCGGCTCCCGGCAGCCCAGCGTGGAGACCCTGGACAGGTAAGCGGGG
G
.
X
150693561
.
GGCTGCGAGGGCGGCGGGGGCCCGAACCC
G
.
X
150693561
.
GGCTGCGAGGGCGGCGGGGGCCCGAACCCGG
G
.
X
150693561
.
GGCTGCGAGGGCGGCGGGGGCCCGAACCCGGGGCCGGCGGGCGGCAGGAGGCCTCCTCGGGCCGCG
G
.