| General information of RDP00379 | |
|---|---|
| Gene Symbol: | AARD |
| RefSeq ID: | NM_001025357 |
| Repeat coordinate: | chr8:116938487-116938505 (+) |
| Repeat size: | 6 |
| Repeat region: | CDS |
| Repeat unit: | CGG |
| Repeat conservation: | PhastCons_score: 0.030; Repeat Conservation from UCSC Genome Browser |
| Amino acid sequence: | AAAAA |
| Gene expression and GO annotation: | BioGPS |
| Protein expression: | Human Protein Altas |
| Gene conservation: | Gene Conservation from UCSC Genome Browser |
| Mapping repeat track to 1000 Genomes: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
8
116938485
.
AGGCGGC
A
100
| Mapping repeat track to ESP: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
8
116938485
.
AGGCGGC
A,AGGC
.
8
116938488
rs374262247
C
A
.
8
116938499
rs187578345
G
A
.
8
116938500
rs369425409
C
A
.
| Mapping repeat track to ExAC: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
8
116938485
rs777722026
AGGCGGCGGC
AGGCGGC,AGGCGGCGGCGGC,AGGC,AGGCGGCGGCGGCGGC,AGGAGGCGGCGGCGGCGGC,A
427851.03
8
116938488
rs374262247
C
T,A
344863.73
8
116938491
rs566716899
C
T,G
229280.55
8
116938492
.
G
T
5634.26
8
116938493
rs770410263
G
GCGT
5240.51
8
116938495
.
G
C
138.69
8
116938496
rs747967818
G
A
59.61
8
116938497
rs534177737
C
G
6679.03
8
116938498
rs777740920
G
A
5265.78
8
116938499
rs187578345
G
A
247694.15
8
116938500
rs369425409
C
A,T
248573.73
8
116938504
.
G
C
57.36
| Mapping repeat track to gnomAD: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
8
116938485
rs777722026
AGGCGGC
A,AGGAGGCGGCGGCGGCGGCGGCGGCGGCGGC,AGGCGGCGGC,AGGAGGCGGCGGCGGC,AGGC,AGGAGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGC
203849.66
8
116938488
rs374262247
C
T
137920.70
8
116938489
.
G
T
131774.06
8
116938491
rs566716899
C
G
132704.60
8
116938492
.
G
T
1283.74
8
116938494
.
C
CGGA
1737.24
8
116938498
rs777740920
G
A
657.41
8
116938499
rs187578345
G
A
245615.82
8
116938500
rs369425409
C
A
245248.28
| Mapping repeat track to Kaviar: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
8
116938485
.
AGGC
A
.
8
116938485
rs757468249
AGGC
A
.
8
116938485
rs575118752
AGGCGGC
A,AGGAGGCGGCGGCGGC,AGGC,AGGCGGCGGC,AGGCGGCGGCGGC
.
8
116938488
rs374262247
C
A,T
.
8
116938488
.
C
CG
.
8
116938491
rs566716899
C
G
.
8
116938493
rs770410263
G
GCGT
.
8
116938496
rs747967818
G
A
.
8
116938496
.
G
GC
.
8
116938497
rs534177737
C
G
.
8
116938498
rs777740920
G
A
.
8
116938499
rs187578345
G
A
.
8
116938499
.
GC
AA
.
8
116938500
rs369425409
C
A
.
8
116938501
.
G
A
.
8
116938501
.
GGC
AGA
.
8
116938503
.
C
G
.