| General information of RDP00373 | |
|---|---|
| Gene Symbol: | SP8 |
| RefSeq ID: | NM_182700 |
| Repeat coordinate: | chr7:20784425-20784443 (-) |
| Repeat size: | 6 |
| Repeat region: | CDS |
| Repeat unit: | CGG |
| Repeat conservation: | PhastCons_score: 0.783; Repeat Conservation from UCSC Genome Browser |
| Amino acid sequence: | GGGGG |
| Gene expression and GO annotation: | BioGPS |
| Protein expression: | Human Protein Altas |
| Gene conservation: | Gene Conservation from UCSC Genome Browser |
| Mapping repeat track to DisGeNET: | |||||
|---|---|---|---|---|---|
| Disease_name | RefSeq | Score | NofPmids | NofSnps | Source |
| Nonorganic psychosis | NM_182700 | 0.31 | 1 | 0 | PSYGENET |
| Mapping repeat track to ESP: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
7
20784424
.
AGCCGCC
A,AGCC
.
| Mapping repeat track to ExAC: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
7
20784424
rs752451137
AGCCGCCGCCGCC
AGCCGCC,AGCCGCCGCC,AGCC,AGCCGCCGCCGCCGCC,AGCCGCCGCCGCCGCCGCC,A
410482
7
20784426
.
C
T
351891.78
7
20784427
.
C
T
353081.01
7
20784428
.
G
A
141825.42
7
20784432
.
C
CACAGAGGCTCTTTTAAAATTGGCTTTGCTGGAGCTCTGTT,A
86575.35
7
20784441
.
C
A
1408.84
7
20784443
rs746951803
G
A,T
4111.88
| Mapping repeat track to gnomAD: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
7
20784424
rs752451137
AGCCGCCGCC
AGCCGCC,AGCCGCCGCCGCC,AGCC,A
18880.50
7
20784431
rs777611879
G
GCACAGAGGCTCTTTTAAAATTGGCTTTGCTGGAGCTCTGTT
4966.21
7
20784432
.
C
CACAGAGGCTCTTTTAAAATTGGCTTTGCTGGAGCTCTGTTCCGTAGAAGGAATTTTAGGTAAGGCTTTTTAAAGCTAAG,CACAGAGGCTCTTTTAAAATTGGCTTTGCTGGAGCTCTGTTCCGTAGAAGGAATTTTAGGTAAGGCTTTTTAAAG,CACAGAGGCTCTTTTAAAATTGGCTTTGCTGGAGCTCTGTTCCGTAGAAGGAATTTTAGGTAAGGCTTTTTAAAGCTAAGCTCAGCCGTAGTTTTGTACCCTCAAATA
4794.90
7
20784434
.
G
GTAGAAGGAATTTTAGGTAAGGCTTTTTAAAGCTAAGCT
691.76
7
20784436
.
C
A
703.74
7
20784440
.
G
GCCT
576.49
| Mapping repeat track to Kaviar: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
7
20784424
.
AGCCGCCGCC
A
.
7
20784424
rs776078614
AGCC
A
.
7
20784424
rs759086117
AGCCGCC
A
.
7
20784424
rs367927423
AGCCGCCGCC
A,AGCC,AGCCGCC,AGCCGCCGCCGCC
.
7
20784431
rs777611879
G
C
.
7
20784432
.
CC
GT
.
7
20784434
.
G
GC
.
7
20784437
.
G
GC
.
7
20784437
.
G
GC
.
7
20784439
.
C
CG
.
7
20784440
.
G
GC
.
7
20784442
.
C
CG
.
7
20784443
rs746951803
G
A
.