| General information of RDP00368 | |
|---|---|
| Gene Symbol: | ID4 |
| RefSeq ID: | NM_001546 |
| Repeat coordinate: | chr6:19837875-19837893 (+) |
| Repeat size: | 6 |
| Repeat region: | CDS |
| Repeat unit: | CGG |
| Repeat conservation: | PhastCons_score: 0.743; Repeat Conservation from UCSC Genome Browser |
| Amino acid sequence: | AAAAA |
| Gene expression and GO annotation: | BioGPS |
| Protein expression: | Human Protein Altas |
| Gene conservation: | Gene Conservation from UCSC Genome Browser |
| Mapping repeat track to DisGeNET: | |||||
|---|---|---|---|---|---|
| Disease_name | RefSeq | Score | NofPmids | NofSnps | Source |
| Hereditary Diffuse Gastric Cancer | NM_001546 | 0.30 | 1 | 0 | CTD_human |
| Mapping repeat track to ESP: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
6
19837874
.
CGCG
C
.
| Mapping repeat track to ExAC: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
6
19837874
rs537169414
CGCGGCGGCG
CGCGGCG,CGCG,CGCGGCGGCGGCG,C
128275.75
6
19837876
rs762103928
CGGCGGCGGCGGCGGCGGCAGCGCGCTGTAAGGCGGCCGA
C
59222.53
6
19837878
.
G
A
7740.80
6
19837888
rs775900142
C
T
1568.93
6
19837890
rs763581402
G
A
1708.41
6
19837891
.
C
G
2434.43
| Mapping repeat track to gnomAD: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
6
19837874
rs537169414
CGCGGCGGCG
CGCGGCG,CGCG,CGCGGCGGCGGCG,CGCGGCGGCGGCGGCG,C
23874.60
6
19837878
.
G
A
5407.01
| Mapping repeat track to Kaviar: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
6
19837874
rs769001140
CGCG
C
.
6
19837874
rs774590629
CGCGGCG
C,CGCG,CGCGGCGGCG
.
6
19837876
rs762103928
CGGCGGCGGCGGCGGCGGCAGCGCGCTGTAAGGCGGCCGA
C
.
6
19837878
.
G
A
.
6
19837888
rs775900142
C
T
.
6
19837890
rs763581402
G
A
.