| General information of RDP00360 | |
|---|---|
| Gene Symbol: | HNRNPA0 |
| RefSeq ID: | NM_006805 |
| Repeat coordinate: | chr5:137753239-137753257 (-) |
| Repeat size: | 6 |
| Repeat region: | CDS |
| Repeat unit: | CGG |
| Repeat conservation: | PhastCons_score: 0.485; Repeat Conservation from UCSC Genome Browser |
| Amino acid sequence: | GGGGG |
| Gene expression and GO annotation: | BioGPS |
| Protein expression: | Human Protein Altas |
| Gene conservation: | Gene Conservation from UCSC Genome Browser |
| Mapping repeat track to ESP: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
5
137753239
.
ACCG
A
.
5
137753256
rs201570235
C
T
.
5
137753256
~rs78232709
C
CGCT
.
| Mapping repeat track to ExAC: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
5
137753232
.
TGCCTCCACC
T
4618.63
5
137753236
rs775885645
TCCACCGCCGCCG
TCCG,TCCACCGCCACCGCCGCCG,TCCGCCGCCG,T
16512.82
5
137753239
rs750002989
ACCGCCGCCGCCG
ACCGCCGCCG,ACCGCCGCCGCCGCCG,A,ACCGCCGCCGCCGCCGCCG,ACCG
359210.78
5
137753242
.
G
A
245028.10
5
137753248
.
G
C
17079.36
5
137753250
rs760456253
C
T
12093.76
5
137753251
rs770573124
G
A
7523.44
5
137753253
rs778866374
CGCCGCT
CGCCGCTGCCGCT,C
862.39
5
137753254
.
G
A
1925.75
5
137753256
rs201570235
C
CGCT,T,CGCCGCT
5317884
5
137753257
rs776039119
G
C
2175.71
| Mapping repeat track to gnomAD: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
5
137753239
rs750002989
ACCGCCGCCGCCG
ACCGCCGCCG,ACCGCCGCCGCCGCCG,A,ACCGCCGCCGCCGCCGCCGCCG,GCCGCCGCCGCCG
8692.48
5
137753250
rs760456253
C
T
1477.14
5
137753256
rs201570235
C
CGCT
281890
| Mapping repeat track to Kaviar: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
5
137753236
rs761347300
TCCACCGCCG
TCCACCGCCACCGCCG,T
.
5
137753239
rs766907230
ACCG
A
.
5
137753239
rs753622859
ACCGCCG
A
.
5
137753239
rs755819401
ACCGCCGCCG
A
.
5
137753239
rs754745167
ACCGCCGCCGCCG
A
.
5
137753248
.
G
C,GC
.
5
137753250
rs760456253
C
T
.
5
137753251
rs770573124
G
A
.
5
137753253
rs778866374
C
CGCCGCT
.
5
137753253
rs748001489
CGCCGCT
C,CGCCGCTGCCGCT
.
5
137753255
.
CC
CCGCT
.
5
137753256
rs201570235
C
CGCT,T
.
5
137753256
rs78232709
C
CGCCGCT,CGCT,CG
.
5
137753257
rs776039119
G
C
.