| General information of RDP00358 | |
|---|---|
| Gene Symbol: | FBXL17 |
| RefSeq ID: | NM_001163315 |
| Repeat coordinate: | chr5:108381011-108381032 (-) |
| Repeat size: | 7 |
| Repeat region: | CDS |
| Repeat unit: | CGG |
| Repeat conservation: | PhastCons_score: 0.024; Repeat Conservation from UCSC Genome Browser |
| Amino acid sequence: | GGGGGG |
| Gene expression and GO annotation: | BioGPS |
| Protein expression: | Human Protein Altas |
| Gene conservation: | Gene Conservation from UCSC Genome Browser |
| Mapping repeat track to ExAC: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
5
108381011
.
ACCGCCG
ACCGCCGCCG,ACCG,A
16462.13
5
108381014
.
G
A
6640.57
5
108381016
.
C
T
990.37
5
108381020
.
G
A
46.52
5
108381023
.
GCCGCCGCCGCAGCCC
G
5634.17
5
108381031
.
C
A
4581.89
| Mapping repeat track to gnomAD: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
5
108381005
.
CCCGCCACCGCCG
CCCGCCACCGCCGCCACCGCCG,CCCGCCACCGCCGCCGCCACCGCCG,CCCG,C
3870.49
5
108381011
.
ACCGCCGCCG
ACCGCCG,ACCGCCGCCGCCG,ACCG,A,ACCGCCGCCGCCGCCG
162724.89
5
108381014
.
G
A
37687.38
5
108381016
.
C
T
32290.84
5
108381017
.
GCCGCCGCCGCCGCCGCAGCCC
G
29097.86
5
108381019
.
C
CGCCGCCGCCGCCGCA
12733.63
5
108381020
.
G
GCCGCCGCCGCCGCAGCCC
12874.33
5
108381022
.
CGCCGCCGCCGCA
C
3847.76
5
108381023
.
GCCGCCGCCGCAGCCC
G
6822.05
5
108381024
.
C
T
6876.11
5
108381029
.
G
A
8353.62
5
108381031
.
C
T
6579.88
| Mapping repeat track to Kaviar: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
5
108381020
.
G
C
.
5
108381021
.
C
T
.
5
108381023
.
G
C
.
5
108381026
.
G
A
.
5
108381029
.
G
A
.
5
108381029
.
GC
CC
.
5
108381032
.
GCAGC
GCCGC
.