General information of RDP00354
Gene Symbol:CPEB2
RefSeq ID:NM_001177381
Repeat coordinate:chr4:15003725-15003743 (+)
Repeat size:6
Repeat region:CDS
Repeat unit:CGG
Repeat conservation:PhastCons_score: 0.998; Repeat Conservation from UCSC Genome Browser
Amino acid sequence:GGGGG
Gene expression and GO annotation: BioGPS
Protein expression:Human Protein Altas
Gene conservation:Gene Conservation from UCSC Genome Browser
Mapping repeat track to 1000 Genomes:
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
4
15003723
.
GGGC
GGGCGGC,GGGCGGCGGC,G
100
Mapping repeat track to ExAC:
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
4
15003708
rs747964922
GGACCTTCCACACCCGGGC
G,AGACCTTCCACACCCGGGC
234670.85
4
15003723
rs528354251
GGGCGGC
GGGCGGCGGC,GGGC,GGGCGGCGGCGGC,GGGCGGCGGCGGCGGC,G
192418.07
4
15003729
.
C
T
2392.06
4
15003735
rs766533750
CGGCGGCGGG
C,CGGCGGCGGGGGCGGCGGG
653.34
4
15003738
rs751755268
C
CGGCGGG
2928.87
4
15003741
.
C
G
11982.38
Mapping repeat track to gnomAD:
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
4
15003723
rs528354251
GGGCGGC
GGGCGGCGGC,GGGCGGCGGCGGC,GGGC,G,GGCGGCGGCGGC,GGGCGGCGGCGGCGGC
116295.57
4
15003726
.
C
CGGCGGCGGCGGCGGCGGCGGG
6119.43
4
15003735
rs766533750
C
CGGCGGCGGG
1781.38
4
15003738
rs751755268
C
CGGCGGG
2222.58
4
15003742
.
G
A
406.40
Mapping repeat track to Kaviar:
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
4
15003723
.
GGGC
AGGC,G,GGGCGGC,GGGCGGCGGC
.
4
15003723
rs527630065
GGGC
G,GGGCGGC,GGGCGGCGGC
.
4
15003735
rs766533750
CGGCGGCGGG
C
.
4
15003738
rs751755268
C
CGGCGGG
.