| General information of RDP00353 | |
|---|---|
| Gene Symbol: | CXXC4 |
| RefSeq ID: | NM_025212 |
| Repeat coordinate: | chr4:104491428-104491449 (-) |
| Repeat size: | 7 |
| Repeat region: | CDS |
| Repeat unit: | CGG |
| Repeat conservation: | PhastCons_score: 0.006; Repeat Conservation from UCSC Genome Browser |
| Amino acid sequence: | GGGGGG |
| Gene expression and GO annotation: | BioGPS |
| Protein expression: | Human Protein Altas |
| Gene conservation: | Gene Conservation from UCSC Genome Browser |
| Mapping repeat track to ExAC: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
4
104491422
.
CCCGCCTCCG
C
480.26
4
104491428
.
TCCG
GCCG,T
8676.19
4
104491440
.
GCCGCCGCCGCCACCCCCC
G
31.15
| Mapping repeat track to gnomAD: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
4
104491416
rs112686895
CCCGCCCCCGCCTCCGCCGCCGCCG
CCCGCCGCCGCCG,C
937
4
104491422
.
CCCGCCTCCGCCGCCGCCGCCG
CCCGCCGCCGCCG,CCCGCCGCCGCCGCCG,C
22593.83
4
104491428
.
TCCGCCGCCGCCG
GCCGCCGCCGCCG,TCCGCCG,TCCGCCGCCGCCGCCG,TCCGCCGCCG,T
74734.57
4
104491434
.
GCCGCCGCCGCCGCCGCCACCCCCC
G
19749.98
4
104491437
.
GCCGCCGCCGCCGCCACCCCCC
G
3408.53
| Mapping repeat track to Kaviar: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
4
104491405
.
CCCCCACCACCCCCGCCCCCGCCTCCGCCGCCGCCGCCGCCGCCGCCACCCCCCCCGCCGCCGCCCCCGCCCCCGCCGCTGCCCC
CCCCCACCACCCCCGCCCCCGCCTCCGCCGCCGCCGCCGCCGCCGCCACCCCCCCCGCCGCCGCCCCCGCCCCCGGCGCTGCCCC
.
4
104491407
rs772756045
CCCACCACCCCCGCCCCCGCCTCCGCCGCCGCCGCCGCCGCCG
C
.