| General information of RDP00317 | |
|---|---|
| Gene Symbol: | ARIH1 |
| RefSeq ID: | NM_005744 |
| Repeat coordinate: | chr15:72474875-72474896 (+) |
| Repeat size: | 7 |
| Repeat region: | CDS |
| Repeat unit: | CGG |
| Repeat conservation: | PhastCons_score: 0.845; Repeat Conservation from UCSC Genome Browser |
| Amino acid sequence: | GGGGGG |
| Gene expression and GO annotation: | BioGPS |
| Protein expression: | Human Protein Altas |
| Gene conservation: | Gene Conservation from UCSC Genome Browser |
| Mapping repeat track to ESP: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
15
72474873
.
TGGC
TGGCGGC,T
.
| Mapping repeat track to ExAC: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
15
72474873
rs866411418
TGGCGGCGGC
TGGCGGCGGCGGC,TGGCGGC,TGGCGGCGGCGGCGGCGGC,T,TGGCGGCGGCGGCGGC,TGGC
2229251.05
15
72474876
rs766176145
C
T
165954.11
15
72474879
rs765117467
CGGCGGCGGCGGCGGCGGTGGTGGT
C
24874.78
15
72474882
.
C
T
17753.85
15
72474883
.
G
A
1573.05
15
72474885
rs751612173
CGGCGGCGGCGGT
C
15469.53
15
72474886
.
G
T
12263.71
15
72474888
.
CGGCGGCGGT
TGGCGGCGGT,C
15568.57
15
72474891
rs759602250
CGGCGGTGGT
TGGCGGTGGT,C,CGGCGGTGGTGGCGGTGGT
18606.32
15
72474893
rs753843976
G
A
14706.81
15
72474894
rs754910711
CGGTGGT
CGGTGGTGGT,CGGCGGTGGTGGT,TGGTGGT,C
68796.61
15
72474896
.
G
T
17090.64
| Mapping repeat track to gnomAD: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
15
72474873
rs866411418
TGGCGGCGGC
TGGCGGCGGCGGC,TGGC,TGGCGGC,TGGCGGCGGCGGCGGC,T
1132086.94
15
72474879
rs765117467
CGGCGGCGGCGGCGGCGGTGGTGGT
C
7328.78
15
72474885
rs751612173
CGGCGGCGGCGGT
C
1415.11
15
72474888
.
CGGCGGCGGT
C
2360.08
15
72474894
rs754910711
CGGT
CGGTGGT,C
5473.54
15
72474896
.
G
T
4221.71
| Mapping repeat track to Kaviar: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
15
72474867
rs771639802
CGGCGGTGGCGGCGGCGGCGGCGGCGGCGGT
C
.
15
72474873
rs760240350
TGGC
T,TGGCGGC
.
15
72474873
rs761777712
TGGCGGCGGC
T,TGGCGGC,TGGCGGCGGCGGC,TGGCGGCGGCGGCGGC,TGGCGGCGGCGGCGGCGGC
.
15
72474873
rs375614248
TGGCGGCGGCGGCGGC
T
.
15
72474876
rs766176145
C
T
.
15
72474879
rs765117467
CGGCGGCGGCGGCGGCGGTGGTGGT
C
.
15
72474885
rs751612173
CGGCGGCGGCGGT
C
.
15
72474889
rs12902861
G
T
.
15
72474891
rs759602250
C
CGGCGGTGGT
.
15
72474893
rs753843976
G
A
.
15
72474894
rs754910711
C
T
.
15
72474894
rs767633154
C
CGGT
.