| General information of RDP00313 | |
|---|---|
| Gene Symbol: | TNFAIP2 |
| RefSeq ID: | NM_006291 |
| Repeat coordinate: | chr14:103127082-103127100 (+) |
| Repeat size: | 6 |
| Repeat region: | CDS |
| Repeat unit: | CGG |
| Repeat conservation: | PhastCons_score: 0.054; Repeat Conservation from UCSC Genome Browser |
| Amino acid sequence: | AAAAA |
| Gene expression and GO annotation: | BioGPS |
| Protein expression: | Human Protein Altas |
| Gene conservation: | Gene Conservation from UCSC Genome Browser |
| Mapping repeat track to DisGeNET: | |||||
|---|---|---|---|---|---|
| Disease_name | RefSeq | Score | NofPmids | NofSnps | Source |
| Rheumatoid Arthritis | NM_006291 | 0.30 | 1 | 0 | CTD_human |
| Mapping repeat track to ESP: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
14
103127089
~rs8176385
CG
C
.
| Mapping repeat track to ExAC: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
14
103127080
rs750032768
TGGCGGCGGC
TGGCGGC,TGGC,TGGCGGCGGCGGC,T
82114.84
14
103127083
.
C
T
63143.54
14
103127086
.
C
A
20308.86
14
103127095
.
C
CG
18228.81
14
103127096
.
G
T
196.88
| Mapping repeat track to gnomAD: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
14
103127080
rs750032768
TGGCGGC
TGGCGGCGGC,TGGCGGCGGCGGCGGC,TGGC,T
258396.27
14
103127083
.
C
CGTT
5390.87
14
103127090
.
G
A
246.14
| Mapping repeat track to Kaviar: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
14
103127080
rs758027801
TGGC
T
.
14
103127080
rs765935696
TGGCGGCGGC
T,TGGCGGC,TGGCGGCGGCGGC
.
14
103127085
.
G
T
.
14
103127086
.
C
G
.
14
103127100
.
G
A
.