| General information of RDP00305 | |
|---|---|
| Gene Symbol: | RAB21 |
| RefSeq ID: | NM_014999 |
| Repeat coordinate: | chr12:71755140-71755158 (+) |
| Repeat size: | 6 |
| Repeat region: | CDS |
| Repeat unit: | CGG |
| Repeat conservation: | PhastCons_score: 0.999; Repeat Conservation from UCSC Genome Browser |
| Amino acid sequence: | GGGGG |
| Gene expression and GO annotation: | BioGPS |
| Protein expression: | Human Protein Altas |
| Gene conservation: | Gene Conservation from UCSC Genome Browser |
| Mapping repeat track to DisGeNET: | |||||
|---|---|---|---|---|---|
| Disease_name | RefSeq | Score | NofPmids | NofSnps | Source |
| Obesity | NM_014999 | 0.30 | 1 | 0 | CTD_human |
| Mapping repeat track to ESP: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
12
71755139
.
GCC
G
.
12
71755140
.
CCGG
C
.
12
71755143
.
GC
G
.
12
71755146
.
GC
G
.
| Mapping repeat track to ExAC: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
12
71755135
.
TGCGGCCGGCGGCGGCGGCGGCGGGGCG
T
1753.11
12
71755138
rs752457154
GGCCGGCGGCGGC
G
2827.73
12
71755140
rs777390216
CCGGCGGCGGCGGCGGCGGGG
CCGGCGGCGGCGGCGGGG,CCGGCGGCGGCGGCGGCGGCGGGG,CCGGCGGCGGCGGGG,CCGGCGGCGGGG,C
286394.43
12
71755141
rs778938267
CGGCGGCGGCGGCGGCGG
C
193629.04
12
71755142
.
G
A
168492.95
12
71755144
.
CGGCGGCGGCGGCGG
C
13996.69
12
71755145
rs748485239
G
A
5977.37
12
71755155
.
GCGGGGC
G
2945.20
12
71755156
.
C
G
13045.67
12
71755158
rs200184881
GGGC
G,CGGC,GGGCGGC
38305.04
| Mapping repeat track to gnomAD: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
12
71755140
rs777390216
CCGGCGGCGG
CCGGCGG,C,CCGGCGGCGGCGG
16202.94
12
71755141
rs778938267
CGGCGGCGGCGGCGGCGG
C
4834.75
12
71755145
rs748485239
G
A
2184.17
12
71755151
.
G
A
850.04
12
71755158
rs200184881
GGGC
G,CGGC,GGGCGGC,GGGCGGCGGC
13997.61
| Mapping repeat track to Kaviar: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
12
71755138
rs752457154
GGCCGGCGGCGGC
G
.
12
71755140
rs755690537
CCGG
C
.
12
71755140
rs757225436
CCGGCGGCGG
C
.
12
71755140
rs753237363
CCGGCGGCGGCGGCGGCGGGG
CCGGCGGCGGCGGCGGCGGCGGGG,CCGGCGGCGGCGGCGGGG,CCGGCGGCGGGG,C
.
12
71755141
rs778938267
CGGCGGCGGCGGCGGCGG
C
.
12
71755144
.
CGG
CGGC
.
12
71755145
rs748485239
G
A
.
12
71755156
.
C
A
.
12
71755158
rs200184881
G
C
.
12
71755158
rs772059783
G
GGGC
.
12
71755158
rs745789029
GGGC
G
.