| General information of RDP00295 | |
|---|---|
| Gene Symbol: | SKIDA1 |
| RefSeq ID: | NM_207371 |
| Repeat coordinate: | chr10:21516891-21516915 (-) |
| Repeat size: | 8 |
| Repeat region: | CDS |
| Repeat unit: | CGG |
| Repeat conservation: | PhastCons_score: 0.786; Repeat Conservation from UCSC Genome Browser |
| Amino acid sequence: | AAAAAAA |
| Gene expression and GO annotation: | BioGPS |
| Protein expression: | Human Protein Altas |
| Gene conservation: | Gene Conservation from UCSC Genome Browser |
| Mapping repeat track to ExAC: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
10
21516863
.
GGCCCCCGCGGCGGCCGCCGCCGCCGCTGCCGCCGCCGCCGCC
GGCCGCC,GGCCGCCGCC,G,GGCCGCCGCTGCCGCCGCCGCCGCC
26198.71
10
21516875
rs757771604
GGCCGCCGCCGCCGCTGCCGCCGCCGCC
GGCCGCCGCCGCTGCCGCCGCCGCC,GGCCGCC,GGCC,GGCCGCCGCCGCC,G
85723.17
10
21516890
rs749533809
TGCCGCCGCCGCC
CGCCGCCGCCGCC,TGCCGCCGCC,TGCC,TGCCGCCGCCGCCGCC,T
209297.29
10
21516893
.
C
T,CGGGTGTTT
137152.52
10
21516894
.
G
GGGTGTTTGCTGCA,GGGTGTTTGCTGCACAGCAGGCT
103529.74
10
21516896
.
C
T,A
99409.79
10
21516897
.
G
GGGTGTTTGCTGCA,GAAAATAAGCAGGGT
70193.19
10
21516898
.
C
CA
57214.81
10
21516899
.
C
A,CA
69936.03
10
21516902
.
C
A,G,T
28302.01
10
21516905
.
C
T
10796.74
10
21516908
.
C
T
2786.55
| Mapping repeat track to gnomAD: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
10
21516875
rs757771604
GGCCGCCGCCGCCGCTGCCGCCGCCGCC
G,GGCCGCCGCCGCC,GGCCGCCGCCGCCGCCGCTGCCGCCGCCGCC,GGCCGCCGCC,GGCCGCC,GGCC
10434.63
10
21516890
rs749533809
TGCCGCCGCCGCC
TGCCGCCGCC,CGCCGCCGCCGCC,TGCCGCCGCCGCCGCC,TGCC,T
109768.81
10
21516903
.
G
A
624.68
10
21516910
.
C
CCGCCGCCGG
573.72
| Mapping repeat track to Kaviar: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
10
21516875
rs757771604
GGCCGCCGCCGCCGCTGCC
G
.
10
21516875
rs745927830
GGCCGCCGCCGCCGCTGCCGCCGCCGCC
G
.
10
21516875
rs781600874
GGCCGCCGCCGCCGCTGCCGCCGCCGCCGCC
G
.
10
21516890
.
TGCCGCCGCCGCC
CGCCGCCGCCGCC,T,TGCC,TGCCGCCGCC,TGCCGCCGCCGCCGCC
.
10
21516890
rs774187108
TGCC
T
.
10
21516890
rs775806197
TGCCGCCGCC
T
.
10
21516890
rs768494987
TGCCGCCGCCGCC
T
.
10
21516902
.
C
T
.
10
21516905
.
C
T
.
10
21516905
.
C
CG
.
10
21516911
.
C
CG
.