| General information of RDP00293 | |
|---|---|
| Gene Symbol: | ZNF281 |
| RefSeq ID: | NM_001281293 |
| Repeat coordinate: | chr1:200409604-200409622 (-) |
| Repeat size: | 6 |
| Repeat region: | CDS |
| Repeat unit: | CGG |
| Repeat conservation: | PhastCons_score: 0.159; Repeat Conservation from UCSC Genome Browser |
| Amino acid sequence: | GGGGG |
| Gene expression and GO annotation: | BioGPS |
| Protein expression: | Human Protein Altas |
| Gene conservation: | Gene Conservation from UCSC Genome Browser |
| Mapping repeat track to DisGeNET: | |||||
|---|---|---|---|---|---|
| Disease_name | RefSeq | Score | NofPmids | NofSnps | Source |
| Malignant neoplasm of breast | NM_001281293 | 0.30 | 0 | 0 | UNIPROT |
| Mapping repeat track to ESP: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
1
200409603
.
TGCC
T
.
| Mapping repeat track to ExAC: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
1
200409594
.
TGCCGCTGCTGCC
T,GGCCGCTGCTGCC,AGCCGCTGCTGCC,TGCCGCCGCTGCTGCC
5295.77
1
200409601
rs753450798
GCTGCCGCCGCCGCCGCCGCCGCCA
G
2138.95
1
200409603
rs778441303
TGCCGCCGCC
TGCCGCCGCCGCCGCC,TGCC,TGCCGCC,TGCCGCCGCCGCC,T,TGCCGCCGCCGCCGCCGCC
452407.33
1
200409604
rs746789612
GCCGCCGCCGCCGCCGCCGCCACTA
G
114270.61
1
200409606
.
C
T,A
113180.94
1
200409607
.
G
A
47144.33
1
200409609
.
C
T
46240.62
1
200409610
rs768990066
GCCGCCGCCGCCGCCACTACCA
G,GCCGCCGCCGCCGCCACTACCGCCGCCGCCGCCACTACCA,GCCGCCGCCGCCGCCACTACCACCGCCGCCGCCGCCACTACCA
44134.55
1
200409613
.
GCCGCCGCCGCCACTACCA
GCCGCCGCCGCCACTACCGCCGCCGCCACTACCA,ACCGCCGCCGCCACTACCA,GCCGCCGCCGCCACTACCACCGCCGCCGCCACTACCA,G
16333.47
1
200409616
.
G
A,GCCGCCGCCA
8904.87
1
200409617
.
C
A
8828.26
1
200409619
.
G
A
9308.46
1
200409620
rs779089714
C
T
16013.90
1
200409622
rs748204343
G
A
13663.71
| Mapping repeat track to gnomAD: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
1
200409601
rs753450798
GCTGCCGCCGCCGCCGCCGCCGCCA
G
1171.13
1
200409603
rs778441303
TGCCGCCGCC
TGCCGCCGCCGCCGCCGCC,TGCCGCCGCCGCC,TGCCGCCGCCGCCGCC,TGCC,T
25595.26
1
200409604
rs746789612
GCCGCCGCCGCCGCCGCCGCCACTA
G
6171.50
1
200409610
rs768990066
G
GCCGCCGCCGCCGCCACTA
2674.06
1
200409613
.
G
GCCGCCGCCGCCACTACCA
1834.76
1
200409615
.
C
CGCA
696.72
1
200409617
.
C
A
779.14
1
200409622
rs748204343
G
A
1015.73
| Mapping repeat track to Kaviar: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
1
200409601
rs753450798
GCTGCCGCCGCCGCCGCCGCCGCCA
G
.
1
200409603
.
TGCCGCCGCC
CGCCGCCGCC,T,TGCCGCC,TGCCGCCGCCGCC,TGCCGCCGCCGCCGCC,TGCCGCCGCCGCCGCCGCC
.
1
200409603
rs756735296
TGCC
T
.
1
200409603
rs780045499
TGCCGCCGCC
T
.
1
200409604
rs746789612
GCCGCCGCCGCCGCCGCCGCCACTA
G
.
1
200409610
rs768990066
GCCGCCGCCGCCGCCACTACCA
G
.
1
200409616
.
G
C
.
1
200409616
.
G
GC
.
1
200409619
.
G
GC
.
1
200409620
rs779089714
C
T
.
1
200409621
.
C
CG
.
1
200409622
rs748204343
G
A
.