| General information of RDP00291 | |
|---|---|
| Gene Symbol: | POU3F1 |
| RefSeq ID: | NM_002699 |
| Repeat coordinate: | chr1:38046637-38046661 (-) |
| Repeat size: | 8 |
| Repeat region: | CDS |
| Repeat unit: | CGG |
| Repeat conservation: | PhastCons_score: 0.070; Repeat Conservation from UCSC Genome Browser |
| Amino acid sequence: | AAAAAAA |
| Gene expression and GO annotation: | BioGPS |
| Protein expression: | Human Protein Altas |
| Gene conservation: | Gene Conservation from UCSC Genome Browser |
| Mapping repeat track to DisGeNET: | |||||
|---|---|---|---|---|---|
| Disease_name | RefSeq | Score | NofPmids | NofSnps | Source |
| Rheumatoid Arthritis | NM_002699 | 0.30 | 1 | 0 | CTD_human |
| Mapping repeat track to ESP: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
1
38046636
.
GGCC
G
.
| Mapping repeat track to ExAC: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
1
38046629
.
GCTCCGCGGCCGCCGCCGCCGCCGCCGC
G
193.01
1
38046636
rs767888115
GGCCGCCGCCGCCGCC
GGCCGCCGCCGCC,GGCCGCCGCCGCCGCCGCC,GGCCGCCGCC,GGCC,GGCCGCC,G
639511.27
1
38046640
.
G
A,C
42322.16
1
38046643
.
G
A
11972.93
1
38046644
.
C
A
10408.09
1
38046645
.
C
T,A
11894.43
1
38046648
.
C
T
3609.11
1
38046654
.
C
A
1473.64
1
38046655
.
G
A
1445.42
1
38046656
.
C
T
105.71
1
38046660
.
CGCG
GGCG,C
6649.72
| Mapping repeat track to gnomAD: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
1
38046636
rs767888115
GGCCGCCGCCGCC
GGCCGCCGCC,GGCCGCCGCCGCCGCC,GGCCGCC,G,GGCC
105918.33
1
38046645
.
C
A,T
1654.61
| Mapping repeat track to Kaviar: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
1
38046636
rs759795723
GGCC
G
.
1
38046636
rs756501993
GGCCGCCGCCGCC
G
.
1
38046636
rs753093803
GGCCGCCGCCGCCGCC
G
.
1
38046654
.
C
A
.