| General information of RDP00283 | |
|---|---|
| Gene Symbol: | BTBD2 |
| RefSeq ID: | NM_017797 |
| Repeat coordinate: | chr19:2015543-2015579 (-) |
| Repeat size: | 12 |
| Repeat region: | CDS |
| Repeat unit: | CCG |
| Repeat conservation: | PhastCons_score: 0.311; Repeat Conservation from UCSC Genome Browser |
| Amino acid sequence: | AAAAAAAAAAA |
| Gene expression and GO annotation: | BioGPS |
| Protein expression: | Human Protein Altas |
| Gene conservation: | Gene Conservation from UCSC Genome Browser |
| Mapping repeat track to 1000 Genomes: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
19
2015541
.
GGGCGGCGGCGGC
G
100
| Mapping repeat track to ExAC: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
19
2015541
rs533915623
GGGC
G
1341.02
| Mapping repeat track to gnomAD: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
19
2015541
rs533915623
GGGCGGCGGCGGCGGCGGCGGC
GGGCGGCGGC,GGGCGGCGGCGGC,GGGCGGCGGCGGCGGCGGC,GGGCGGCGGCGGCGGC,GGGCGGCGGCGGCGGCGGCGGCGGC,G
6336012.32
19
2015544
.
C
CGGG,A
5100896.02
19
2015558
.
G
A
100531.53
19
2015571
.
CGG
C
2110.07
19
2015573
.
G
A
1459.38
19
2015574
.
CGGCG
C,CCG
1216.25
19
2015577
.
CG
C
1018.20
19
2015578
.
G
C
2856.93
| Mapping repeat track to Kaviar: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
19
2015541
.
GGGC
G
.
19
2015541
.
GGGCGGC
G,GGGC
.
19
2015541
.
GGGCGGCGGC
G
.
19
2015541
rs533915623
GGGCGGCGGCGGC
G,GGGCGGCGGC
.
19
2015541
.
GGGCGGCGGCGGCGGCGGCGGC
G
.