| General information of RDP00269 | |
|---|---|
| Gene Symbol: | USF3 |
| RefSeq ID: | NM_001009899 |
| Repeat coordinate: | chr3:113657265-113657298 (-) |
| Repeat size: | 11 |
| Repeat region: | CDS |
| Repeat unit: | CAG |
| Repeat conservation: | PhastCons_score: 0.982; Repeat Conservation from UCSC Genome Browser |
| Amino acid sequence: | QQQQQQQQQQQ |
| Gene expression and GO annotation: | BioGPS |
| Protein expression: | Human Protein Altas |
| Gene conservation: | Gene Conservation from UCSC Genome Browser |
| Mapping repeat track to ClinVar: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
3
113657263
218482
TTGC
T
.
| Mapping repeat track to ESP: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
3
113657287
rs367807278
C
T
.
| Mapping repeat track to ExAC: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
3
113657257
rs764783728
TTGCTGTTGC
TTGTTGC,T
1450.74
3
113657265
rs778922613
GC
G
415306746.82
3
113657266
rs62265537
CTG
TTG,C,CTGTTG
415275149.54
3
113657267
rs745985164
TGCTGCTGCTGCTGC
TTGCTGCTGCTGC,TTGCTGC,T
385201342.17
3
113657269
rs748091328
CTGCT
TTGCT,C
384734986.51
3
113657275
rs772545713
C
CTGG
118884917.67
3
113657282
.
TG
T
409991.41
3
113657284
.
CTGCTG
C
409993.02
3
113657294
rs776122145
TGC
T,TC
5017.72
3
113657296
.
CTG
C
4972.01
3
113657297
rs747331094
TG
T
2114.11
| Mapping repeat track to gnomAD: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
3
113657263
rs754864807
TTGCTGCTGCTGCTGC
TTGCTGC,TTGCTGCTGCTGC,TTGCTGCTGC,TTGCTGCTGCTGCTGCTGCTGC,TTGCTGCTGCTGCTGCTGC,T
18139432.45
3
113657264
.
TGC
T
13805971.92
3
113657265
rs778922613
GC
G
13795654.59
3
113657269
rs748091328
C
T
8853647.73
3
113657275
rs772545713
C
CTGG
459007.27
3
113657294
rs776122145
TG
T
1288.19
3
113657296
.
CTG
C
1287.42
| Mapping repeat track to Kaviar: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
3
113657257
.
TTGCTGTTGCTGCTGCTG
TTGCTGTTG
.
3
113657257
rs764783728
TTGCTGTTGC
T
.
3
113657260
rs755595959
CTGTTGCTG
C
.
3
113657261
.
TGTTGC
TGCTGC
.
3
113657261
.
TGTTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCT
TGTTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCT
.
3
113657263
.
TTGCTGCTGC
T
.
3
113657263
.
TTGCTGCTGCTGCTGCTGCTGCTGC
TTGCTGCTGCTGCTGC
.
3
113657263
rs59990801
TTGC
T,TTGCTGC,TTGCTGCTGC
.
3
113657263
rs751292894
TTGCTGC
T,TTGC,TTGCTGCTGC
.
3
113657263
rs59601191
TTGCTGCTGC
T,TTGC,TTGCTGC,TTGCTGCTGCTGC,TTGCTGCTGCTGCTGC
.
3
113657263
rs749467269
TTGCTGCTGCTGC
T,TTGC,TTGCTGC,TTGCTGCTGC,TTGCTGCTGCTGCTGC,TTGCTGCTGCTGCTGCTGC
.
3
113657263
.
TTGCTGCTGCTGCTGC
T,TTGCTGC,TTGCTGCTGCTGC
.
3
113657263
.
TTGCTGCTGCTGCTGCTGC
T,TTGCTGCTGC
.
3
113657264
.
TGCTGCTGCT
T
.
3
113657264
.
TGCTGCTGCTGCT
TGCT
.
3
113657264
.
TGCTGCTGCTGCTGCT
TGCTGCT
.
3
113657264
.
TGCTGCTGCTGCTGCTGCTGC
TGCTGCTGCTGC
.
3
113657264
.
TGCTGCTGCTGCTGCTGCTGCTGC
TGCTGCTGCTGCTGC
.
3
113657266
rs62265537
C
T
.
3
113657267
rs745985164
TGCTGCTGC
T
.
3
113657269
rs748091328
C
T
.
3
113657272
rs62265538
C
T
.
3
113657275
.
C
T
.
3
113657275
rs772545713
C
CTGG
.
3
113657278
.
C
T
.
3
113657287
rs367807278
C
T
.
3
113657292
rs201212461
G
T
.
3
113657292
rs767544025
GCT
G
.
3
113657292
rs775907175
GCTGCTGCTT
G
.
3
113657294
rs776122145
TGC
T
.
3
113657297
rs747331094
TG
T,TT
.