| General information of RDP00204 | |
|---|---|
| Gene Symbol: | KDM1B |
| RefSeq ID: | NM_153042 |
| Repeat coordinate: | chr6:18155437-18155455 (+) |
| Repeat size: | 6 |
| Repeat region: | 5' UTR |
| Repeat unit: | CGG |
| Repeat conservation: | PhastCons_score: 1.000; Repeat Conservation from UCSC Genome Browser |
| Amino acid sequence: | - |
| Gene expression and GO annotation: | BioGPS |
| Protein expression: | Human Protein Altas |
| Gene conservation: | Gene Conservation from UCSC Genome Browser |
| Mapping repeat track to DisGeNET: | |||||
|---|---|---|---|---|---|
| Disease_name | RefSeq | Score | NofPmids | NofSnps | Source |
| familial atrial fibrillation | NM_153042 | 0.30 | 1 | 0 | CTD_human |
| Mapping repeat track to 1000 Genomes: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
6
18155436
.
AGCGGCGGCG
A
100
| Mapping repeat track to gnomAD: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
6
18155436
rs765530775
AGCGGCGGCG
AGCGGCG,A,AGCGGCGGCGGCG,AGCGGCGGCGGCGGCG,AGCGGCGGCGGCGGCGGCG
172179.84
6
18155444
.
C
T
84124.63
6
18155454
.
G
A
427.44
| Mapping repeat track to Kaviar: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
6
18155436
rs545050827
AGCGGCGGCG
A
.
6
18155439
.
GGCGGC
CGGCGGC
.
6
18155440
.
G
GC
.
6
18155446
.
GC
G,GG
.
6
18155449
.
GC
G,GG
.
6
18155452
.
GC
G
.