| General information of RDP00202 | |
|---|---|
| Gene Symbol: | PRELID1 |
| RefSeq ID: | NM_001271828 |
| Repeat coordinate: | chr5:177303819-177303837 (+) |
| Repeat size: | 6 |
| Repeat region: | 5' UTR |
| Repeat unit: | CGG |
| Repeat conservation: | PhastCons_score: 0.499; Repeat Conservation from UCSC Genome Browser |
| Amino acid sequence: | - |
| Gene expression and GO annotation: | BioGPS |
| Protein expression: | Human Protein Altas |
| Gene conservation: | Gene Conservation from UCSC Genome Browser |
| Mapping repeat track to gnomAD: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
5
177303817
rs577990702
TGGCGGCGGC
TGGCGGCGGCGGC,TGGCGGCGGCGGCGGCGGCGGC,TGGCGGCGGCGGCGGC,TGGCGGCGGCGGCGGCGGCGGCGGCGGC,TGGCGGCGGCGGCGGCGGC,T
95592.63
5
177303833
.
G
GGCGGCAGCT
454.48
5
177303837
.
G
GCGGCGGCGT
840.42
| Mapping repeat track to Kaviar: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
5
177303817
.
TGGC
TCGGC,T
.
5
177303820
.
C
CG
.
5
177303822
.
G
GC
.
5
177303823
.
C
CG
.
5
177303826
rs549111620
C
T
.
5
177303830
rs561098154
G
A
.
5
177303836
rs528695502
G
A
.