| General information of RDP00196 | |
|---|---|
| Gene Symbol: | EXOC3 |
| RefSeq ID: | NM_007277 |
| Repeat coordinate: | chr5:443231-443276 (+) |
| Repeat size: | 15 |
| Repeat region: | 5' UTR |
| Repeat unit: | CGG |
| Repeat conservation: | PhastCons_score: 0.030; Repeat Conservation from UCSC Genome Browser |
| Amino acid sequence: | - |
| Gene expression and GO annotation: | BioGPS |
| Protein expression: | Human Protein Altas |
| Gene conservation: | Gene Conservation from UCSC Genome Browser |
| Mapping repeat track to gnomAD: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
5
443207
.
GCGAAGGCGGAGGGGGCGGCGGGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGC
G,GGGCGGAGGGGGCGGCGGGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGC
770281.92
5
443211
.
AGGCGGAGGGGGCGGCGGGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGC
AGGCGGAGGGGGCGGAGGGGGCGGCGGGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGC,AGGCGGAGGGGGCGGAGGGGGCGGAGGGGGCGGCGGGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGC,A,AGGCGGCGGGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGC
1023746.80
5
443217
rs558906544
AGGGGGCGGCGGGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGC
CGGGGGCGGCGGGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGC,AGGGGGCGGCGGGGGCGGCGGGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGC,A,AGGCGGCGGCGGCGGCGGCGGCGGC
756783.64
5
443220
rs781287119
GGGCGGCGGGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGC
GGGCGGCGGC,GGGC,GGGCGGCGGCGGCGGCGGC,G,GGGCGGCGGCGGCGGC
6598563.22
5
443229
rs182219748
GGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGC
GGGCGGCGGCGGC,G,GGGCGGCGGCGGCGGCGGC,GGGCGGCGGCGGCGGCGGCGGCGGC,GGGCGGCGGCGGCGGCGGCGGC
14742644.21
5
443231
.
GC
G
13906397.03
5
443232
.
C
CGGCGGG,CGGAGGGGGCGGCGGG
13909221.10
5
443233
.
GGCGGCGGCGGCGGCGGC
G
13843325.67
5
443234
.
GC
G
13844179.10
5
443235
.
C
A,CGGG
13860497.26
5
443236
.
GGCGGCGGCGGCGGCGGCGGC
G,GGGCGGC,GGGCGGCGGCGGCGGCGGC
13820991.37
5
443237
.
GC
G
13860874.72
5
443238
.
C
G,CGGG,A
13865872.91
5
443239
.
GGCGGCGGCGGCGGCGGCGGCGGC
GGGCGGCGGCGGC,GGGCGGCGGCGGCGGCGGCGGC,GGGCGGCGGCGGCGGCGGC,G
13769087.12
5
443240
rs796743116
GC
G
13782928.81
5
443241
rs374353264
C
T,CGGCGGCGGG,G
13773321.03
5
443242
.
GGCGGCGGCGGCGGCGGCGGC
G,GGGCGGCGGCGGC
13675774.76
5
443243
.
GC
G
13664514.04
5
443244
.
C
T
13675813.17
5
443245
.
GGCGGCGGCGGC
G,GGGCGGC,AGCGGCGGCGGC
13560845.62
5
443246
.
GC
G
13545335.67
5
443247
rs11134039
C
G
13553633.85
5
443248
.
GGC
G
13498436.59
5
443249
.
G
A
13494970.74
5
443250
rs11134040
C
G,T,A
13525835.45
5
443252
.
G
T
4755043.17
5
443253
rs368689128
CGG
TGG,C
4780425.12
5
443256
rs534941835
CGGCGGCGGCGGCGGCG
AGGCGGCGGCGGCGGCG,C
4689380.01
5
443257
.
G
GTA
4549480.36
5
443258
.
G
T
4567775.74
5
443259
rs373080314
CGG
C,TGG,GGG
4586445.96
5
443260
.
G
T
1760959.19
5
443261
.
G
T
1762625.92
5
443262
rs553176185
C
T,A,G
2784019.53
5
443275
.
G
T
374.32
| Mapping repeat track to Kaviar: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
5
443204
.
GCAGCGAAGGCGGAGGGGGCGGCGGGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGC
GG
.
5
443205
.
CAGCGAAGGCGGAGGGGGCGGCGGGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGC
CAGCGAAGGCGGAGGG,G
.
5
443205
.
CAGCGAAGGCGGAGGGGGCGGCGGGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGTAG
CAGCGAAGGCGGAGGGGGCGGCGGCGGCGGCGGCGTAG
.
5
443205
.
CAGCGAAGGCGGAGGGGGCGGCGGGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGTAGC
CAGCGAAGGCGGAGGGGGCGGCGGCGGCGGCGGCGTAGC,CAGCGAAGGCGGAGGGGGCGGCGGGGGCGGCGGCGGCGGCGTAGC,CAGCGAAGGCGGAGGGGGCGGCGGGGGCGGCGGCGGTGGCGGCGGCGGCGGCGTAGC,GGGCGGCGGCGGCGGCGGCGTAGC
.
5
443212
.
GGCGGAGGGGGCGGCGGGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG
GGCGGAGGGGGCGGCG
.
5
443213
.
GCGGAGGGGGCGGCGGGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGC
GCGGAGGG
.
5
443215
.
GGAGGGGGCGGCGGGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGTAGC
GGAGGGGGCGGCGGGGGCGGCGGCGGCGGCGTAGC
.
5
443218
.
GGGGGCGGCGGGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGC
GGG
.
5
443220
.
GGGCGGCGGGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGC
G
.
5
443220
.
GGGCGGCGGGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGC
GGGC
.
5
443220
.
GGGCGGCGGGGGCGGCGGCGGCGGCGGCGGCGGC
G
.
5
443220
rs781287119
GGGCGGCGGGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGC
G,GGGCGGCGGGGGCGGCGGC,GGGCGGCGGGGGCGGCGGCGGCGGCGGCGGCGGCGGC,GGGCGGCGGGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGC
.
5
443220
.
GGGCGGCGGGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGC
G,GGGCGGCGGC
.
5
443221
.
GGCGGCGGGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG
G
.
5
443221
.
GGCGGCGGGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGC
GGC,GGCGGCGGG,GGCGGCGGGGGCGGCGGCGGT
.
5
443221
.
GGCGGCGGGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGC
GGCGGCGGCGGC
.
5
443221
.
GGCGGCGGGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGC
GGCGGCGGCGGCGGC
.
5
443221
.
GGCGGCGGGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGC
GGCGGCGGCGGCGGCGGC
.
5
443221
.
GGCGGCGGGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGTAGC
GGCGGCGGCGGCGGCGGCGTAGC
.
5
443223
.
CGGCGGGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGC
C,CGGCGGG,CGGCGGGGGCGGCGGCGGT
.
5
443229
.
GGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGC
A,G
.
5
443229
.
GGGC
G
.
5
443229
.
GGGCGGCGGCGGC
G
.
5
443229
.
GGGCGGCGGCGGCGGC
G
.
5
443229
.
GGGCGGCGGCGGCGGCGGC
G
.
5
443229
rs11274307
GGGCGGCGGCGGCGGCGGCGGC
G,GGGCGGCGGCGGCGGCGGC
.
5
443229
.
GGGCGGCGGCGGCGGCGGCGGCGGC
G
.
5
443229
.
GGGCGGCGGCGGCGGCGGCGGCGGCGGC
G
.
5
443229
.
GGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGC
G,GGGCGGCGGCGGC,GGGCGGCGGCGGT,GGGCGGCGGG
.
5
443229
.
GGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGC
G
.
5
443230
.
GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGC
GGCGGCGGCGGC
.
5
443230
.
GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGC
GGCGGCGGCGGCGGC
.
5
443235
.
C
A
.
5
443235
.
CGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGG
CGGCGGCGG
.
5
443238
.
C
G
.
5
443238
.
CGGCGGCGGCGGCGGCGGCGGCGGC
CGGT
.
5
443240
.
GCGGCGGCGGCGGCGGCGGCGGC
GT
.
5
443241
rs374353264
C
A,T
.
5
443241
rs796743116
CGGCGGCGGCGGCGGCGGCGGC
T
.
5
443244
.
C
G
.
5
443245
.
G
A
.
5
443247
rs11134039
C
A
.
5
443249
.
GC
AA
.
5
443250
rs11134040
C
G
.
5
443253
rs368689128
C
G
.
5
443255
.
G
A
.
5
443256
rs534941835
C
A
.
5
443258
.
G
T
.
5
443259
rs373080314
C
A,G
.
5
443262
rs553176185
C
A,G,T
.
5
443265
.
C
G
.
5
443271
rs542004313
C
G
.